RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GABREP78334 506 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 DEFA5Q01523 94 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC25A47Q6Q0C1 308 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 HDDC2Q7Z4H3 204 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 PTX4Q96A99 478 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 SPACA9Q96E40 222 aaPredicted RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 NARS2Q96I59 477 aaKnown RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 MYOZ1Q9NP98 299 aaPredicted RBP11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 CSAG2Q9Y5P2 127 aa11.87□□□□□ -0.51
GTF2F1-201ENST00000394456 A0A0A6YYH2 397 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 A0A1W2PNV4 684 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 A6NJ64 397 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 F5H5K5 113 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 CDCP2Q5VXM1 449 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 RAB12Q6IQ22 244 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM185AQ8NFB2 350 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 ELP5Q8TE02 316 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 FOXRED1Q96CU9 486 aaPredicted RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 RAB3CQ96E17 227 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 GNRHR2Q96P88 292 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 GPER1Q99527 375 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 ARRDC1-AS1Q9H2J1 176 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 WDR54Q9H977 334 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 SDHAF3Q9NRP4 125 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC39A1Q9NY26 324 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 IGKV1D-8A0A087WSZ0 117 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 PMS2P1A4D2B8 440 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 ATP6V1G2-DDX39BF2Z307 99 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 UBBP0CG47 229 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 PPIAP62937 165 aaKnown RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 RPS27AP62979 156 aaKnown RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 UBA52P62987 128 aaKnown RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 DTWD2Q8NBA8 298 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 MRGPRX4Q96LA9 322 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF385AQ96PM9 386 aaKnown RBP11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 PHB2Q99623 299 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 RNF126Q9BV68 326 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 B3GALT1Q9Y5Z6 326 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
GTF2F1-201ENST00000394456 IGHV1-45A0A0A0MS14 117 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 A0A0B4J2A0 478 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 A0A0D9SG52 128 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 C9J4A7 227 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNHIT1O43257 154 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 SUMO3P55854 103 aaPredicted RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 MC2RQ01718 297 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 SRSF4Q08170 494 aaKnown RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 MOB3CQ70IA8 216 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 OR6S1Q8NH40 331 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 RHBDD1Q8TEB9 315 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 RNF138Q8WVD3 245 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 UQCC2Q9BRT2 126 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 SHPKQ9UHJ6 478 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 FRYQ5TBA9 3013 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 WDPCPO95876 746 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 COX6A1P12074 109 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC25A4P12235 298 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 FAHP16930 419 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ZNF43P17038 809 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 GLRA1P23415 457 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 PNLDC1Q8NA58 520 aaKnown RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 ZSCAN4Q8NAM6 433 aaPredicted RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 OR13G1Q8NGZ3 307 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 OR51F2Q8NH61 342 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 LHFPL5Q8TAF8 219 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 PIGTQ969N2 578 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 TMEM59Q9BXS4 323 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 NXT1Q9UKK6 140 aaKnown RBP11.85□□□□□ -0.51
GTF2F1-201ENST00000394456 DKK1O94907 266 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 F12P00748 615 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 AGTR1P30556 359 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 MPLP40238 635 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 RPS18P62269 152 aaKnown RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.511e-7■■■■□ 26.4
GTF2F1-201ENST00000394456 RSPO1Q2MKA7 263 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 OR4K17Q8NGC6 315 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 LRRC46Q96FV0 321 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 JSRP1Q96MG2 331 aaPredicted RBP11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 SLC25A32Q9H2D1 315 aa11.84□□□□□ -0.51
GTF2F1-201ENST00000394456 PCDHB10Q9UN67 800 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms