RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ANKRD61A6NGH8 418 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 DIO1P49895 249 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 DSC1Q08554 894 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 EXOSC7Q15024 291 aaKnown RBP12.22□□□□□ -0.45
USP49-203ENST00000394253 ACSM6Q6P461 480 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 OR8A1Q8NGG7 326 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 CHST8Q9H2A9 424 aa12.22□□□□□ -0.45
USP49-203ENST00000394253 OPRK1P41145 380 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 ADTRPQ96IZ2 230 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 C12orf42Q96LP6 360 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 SNHG28P0DPA3 235 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 CD96P40200 585 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 ZNF789Q5FWF6 425 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 PDPNQ86YL7 162 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 FUNDC1Q8IVP5 155 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 FAHD2AQ96GK7 314 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 ACY3Q96HD9 319 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 ULBP3Q9BZM4 244 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 MMACHCQ9Y4U1 282 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 RNASE1P07998 156 aaKnown RBP12.21□□□□□ -0.45
USP49-203ENST00000394253 BRS3P32247 399 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 CAMPP49913 170 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 HTRA3P83110 453 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 NPY5RQ15761 445 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 LPAR5Q9H1C0 372 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 TMED3Q9Y3Q3 217 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 MED13Q9UHV7 2174 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 RAB38P57729 211 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 BCL7CQ8WUZ0 217 aaPredicted RBP12.21□□□□□ -0.45
USP49-203ENST00000394253 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 SH2D2AQ9NP31 389 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 C1orf105O95561 183 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 TGIF2LYQ8IUE0 185 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
USP49-203ENST00000394253 SLC25A43Q8WUT9 341 aaPredicted RBP12.21□□□□□ -0.45
USP49-203ENST00000394253 GNB2P62879 340 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 POMT2Q9UKY4 750 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 MEIKINA0A087WXM9 373 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 PDE6DO43924 150 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 FCRL6Q6DN72 434 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.46
USP49-203ENST00000394253 DTD2Q96FN9 168 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 TBX15Q96SF7 602 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 BANF2Q9H503 90 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 UQCC1Q9NVA1 299 aa12.21□□□□□ -0.46
USP49-203ENST00000394253 LAMTOR5O43504 91 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 GABARAPL3Q9BY60 117 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 CDCP1Q9H5V8 836 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 LIPAP38571 399 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 D2HGDHQ8N465 521 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 LCORQ96JN0 433 aaPredicted RBP12.2□□□□□ -0.46
USP49-203ENST00000394253 SMG9Q9H0W8 520 aaKnown RBP12.2□□□□□ -0.46
USP49-203ENST00000394253 TMEM38AQ9H6F2 299 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 KCND3Q9UK17 655 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 HAPLN1P10915 354 aaPredicted RBP12.2□□□□□ -0.46
USP49-203ENST00000394253 RPS4Y1P22090 263 aaKnown RBP12.2□□□□□ -0.46
USP49-203ENST00000394253 NR0B2Q15466 257 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 FAM24BQ8N5W8 94 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 WBP2Q969T9 261 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 CHST2Q9Y4C5 530 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 FZD9O00144 591 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 NTSR1P30989 418 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 C3P01024 1663 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 SOD2P04179 222 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 YBX1P67809 324 aaKnown RBP12.2□□□□□ -0.46
USP49-203ENST00000394253 PRDX4Q13162 271 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 IGFBP7Q16270 282 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 SLC6A1P30531 599 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 CST9Q5W186 159 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 PARM1Q6UWI2 310 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 PRSS45Q7RTY3 260 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 SERINC4A6NH21 518 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 FGF18O76093 207 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 NMUP48645 174 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 ARF6P62330 175 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 TMEM136Q6ZRR5 245 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 CALHM1Q8IU99 346 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 LINC00346Q8IVM7 164 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 UBALD2Q8IYN6 164 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 TMEM178AQ8NBL3 297 aa12.2□□□□□ -0.46
USP49-203ENST00000394253 ELNP15502 786 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 IER5LQ5T953 404 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 NAA50Q9GZZ1 169 aaKnown RBP12.19□□□□□ -0.46
USP49-203ENST00000394253 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 SYNGR2O43760 224 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 VAMP5O95183 116 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 HNRNPA1P09651 372 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP49-203ENST00000394253 GGTA1PQ4G0N0 100 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 C9orf135Q5VTT2 229 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 AFMIDQ63HM1 303 aa12.19□□□□□ -0.46
USP49-203ENST00000394253 FAM174AQ8TBP5 190 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms