RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PPP1CCP36873 323 aaKnown RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 C11orf91Q3C1V1 193 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SFTPA2Q8IWL1 248 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SFTPA1Q8IWL2 248 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 FBXO27Q8NI29 283 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 FYTTD1Q96QD9 318 aaKnown RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 MED20Q9H944 212 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 USP3Q9Y6I4 520 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 NUMBLQ9Y6R0 609 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 CLDN34H7C241 214 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ZBTB25P24278 435 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM183AQ8IXX5 376 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 PLA2G12AQ9BZM1 189 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ZFP30Q9Y2G7 519 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 KLF13Q9Y2Y9 288 aaPredicted RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 PIGPP57054 158 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 RPL27P61353 136 aaKnown RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SSX1Q16384 188 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 ST8SIA1Q92185 356 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 CMBLQ96DG6 245 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 THOC3Q96J01 351 aaKnown RBP13.39□□□□□ -0.27
CCDC50-201ENST00000392455 KMT2EQ8IZD2 1858 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 FAM74A7A6NL05 159 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 EFSO43281 561 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 COL5A1-AS1Q5SY13 56 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 SARAFQ96BY9 339 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 FAM206AQ9NX38 181 aa13.39□□□□□ -0.27
CCDC50-201ENST00000392455 DNAL4O96015 105 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 FOXK2Q01167 660 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 SORT1Q99523 831 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 CAMKMTQ7Z624 323 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 OR5AS1Q8N127 324 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF480Q8WV37 535 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PP6455Q8WZ26 134 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM70Q9BUB7 260 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 ATP23Q9Y6H3 246 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 SYNGR2O43760 224 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 C11orf54Q9H0W9 315 aaPredicted RBP13.38□□□□□ -0.27
CCDC50-201ENST00000392455 CTSFQ9UBX1 484 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 H0YGG7 62 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 CTSLP07711 333 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PGA4P0DJD7 388 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PGA5P0DJD9 388 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM128Q5BJH2 165 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 MRPL43Q8N983 215 aaKnown RBP13.38□□□□□ -0.27
CCDC50-201ENST00000392455 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.38□□□□□ -0.27
CCDC50-201ENST00000392455 TEAD3Q99594 435 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 HCRTR1O43613 425 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 SLC5A2P31639 672 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PIGAP37287 484 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 FAM71CQ8NEG0 241 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM30CPA0ZSE6 113 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 MFSD2BA6NFX1 497 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 FABP2P12104 132 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 ERVS71-1P61550 626 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 Q56UQ5 140 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 ATOH1Q92858 354 aaPredicted RBP13.38□□□□□ -0.27
CCDC50-201ENST00000392455 SGK494Q96LW2 274 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 TRAV20A0A0B4J274 112 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 P2RY10O00398 339 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 C1orf140Q5VVS0 124 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 OR4A47Q6IF82 309 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 PROCRQ9UNN8 238 aa13.38□□□□□ -0.27
CCDC50-201ENST00000392455 CACNA1IQ9P0X4 2223 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SULT1A1P50225 295 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 HIST3H3Q16695 136 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 LRRC26Q2I0M4 334 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 WDR74Q6RFH5 385 aaPredicted RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 ADTRPQ96IZ2 230 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 TMEM268Q5VZI3 342 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 PAQR6Q6TCH4 344 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 WDR31Q8NA23 367 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 GPR137Q96N19 417 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 PCNX2A6NKB5 2137 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 LRRC37A3O60309 1634 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 LRP3O75074 770 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SMIM6P0DI80 62 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 INPP5JQ15735 1006 aaPredicted RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SYPL1Q16563 259 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 FAM78AQ5JUQ0 283 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 LAIR1Q6GTX8 287 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 NHLRC1Q6VVB1 395 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 LANCL2Q9NS86 450 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 ANKRD61A6NGH8 418 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 C12orf54Q6X4T0 127 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 EGLN2Q96KS0 407 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 FBXO4Q9UKT5 387 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 A0A1W2PPC4 97 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 JUNBP17275 347 aaPredicted RBP13.37□□□□□ -0.27
CCDC50-201ENST00000392455 SELENBP1Q13228 472 aa13.37□□□□□ -0.27
CCDC50-201ENST00000392455 ZNF273Q14593 569 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms