RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 GPR61Q9BZJ8 451 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SLC25A31Q9H0C2 315 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LIME1Q9H400 295 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 CNTD2Q9H8S5 307 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 UNKLQ9H9P5 680 aaKnown RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 BCO1Q9HAY6 547 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 TAF9BQ9HBM6 251 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 CAPN10Q9HC96 672 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 HCFC1R1Q9NWW0 138 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LRIT1Q9P2V4 623 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 PRODH2Q9UF12 536 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SUSD2Q9UGT4 822 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LAMP5Q9UJQ1 280 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 FOXD3Q9UJU5 478 aaPredicted RBP3.05□□□□□ -1.92
TRAV39-201ENST00000390466 IKZF2Q9UKS7 526 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 RAB22AQ9UL26 194 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 HSF4Q9ULV5 492 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 CA14Q9ULX7 337 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 GTF2A1LQ9UNN4 478 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SRPK3Q9UPE1 567 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 B9D1Q9UPM9 204 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 SLC17A4Q9Y2C5 497 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 LRP12Q9Y561 859 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 MTCH2Q9Y6C9 303 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 WNT6Q9Y6F9 365 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 PIAS3Q9Y6X2 628 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 R4GMQ9 66 aa3.05□□□□□ -1.92
TRAV39-201ENST00000390466 BRWD1Q9NSI6 2320 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CABIN1Q9Y6J0 2220 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 A0A087X0M5 115 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 KIR2DL5BA0A0G2JN68 375 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 KIR2DL5BA0A0G2JPC4 375 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 A0A1B0GX30 115 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 PRSS37A4D1T9 235 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 OR5H15A6NDH6 313 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 C5orf51A6NDU8 294 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 OTOL1A6NHN0 477 aaPredicted RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 OR5H1A6NKK0 313 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF727A8MUV8 499 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 GRXCR1A8MXD5 290 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 FTCDNL1E5RQL4 147 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 H7C1Q1 480 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 K7EPK0 472 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SYT7O43581 403 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 HCRTR1O43613 425 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 B3GALT2O43825 422 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 NME2P1O60361 137 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 OR2C1O95371 312 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 PTBP3O95758 552 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 F10P00742 488 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 IFNA17P01571 189 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 IGLV3-1P01715 115 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 AMBPP02760 352 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CSN2P05814 226 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 C8AP07357 584 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CHRM2P08172 466 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SNRPCP09234 159 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SLC35E2P0CK97 266 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 MYOGP15173 224 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 HIST1H1DP16402 221 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 GNB3P16520 340 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF17P17021 662 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 AKR1C4P17516 323 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 KLK2P20151 261 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 COL9A1P20849 921 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CCL1P22362 96 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 VAMP1P23763 118 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CXCR1P25024 350 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CMPK1P30085 196 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 GDI1P31150 447 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 IL2RGP31785 369 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 FCGR2CP31995 323 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 PPM1AP35813 382 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 RPL4P36578 427 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 P2RY1P47900 373 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 TMEM33P57088 247 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 RAB38P57729 211 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 RAB4BP61018 213 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 EIF5AP63241 154 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ADAM8P78325 824 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SLC35A1P78382 337 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CCL20P78556 96 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SPOCK1Q08629 439 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 FUT7Q11130 342 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ENPP2Q13822 863 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 CCINQ13939 588 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ELAVL3Q14576 367 aaKnown RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ICAM4Q14773 271 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 JOSD1Q15040 202 aaPredicted RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 SLC9A3R2Q15599 337 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 TOMM34Q15785 309 aaPredicted RBP3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ODF4Q2M2E3 257 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 DEFB134Q4QY38 66 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ACTBL2Q562R1 376 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ALG10Q5BKT4 473 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 KRBOX4Q5JUW0 171 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 ZNF506Q5JVG8 444 aa3.04□□□□□ -1.92
TRAV39-201ENST00000390466 FAM90A2PQ658T7 463 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms