RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 SDHAF2Q9NX18 166 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF224Q9NZL3 707 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 TNFSF18Q9UNG2 199 aa13.16□□□□□ -0.3
SCFD2-201ENST00000388940 C19orf67A6NJJ6 358 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 NPIPA2E9PIF3 369 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 E9PLN8 166 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 NPIPA3F8WFD2 350 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 DNPH1O43598 174 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 OR2F2O95006 317 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 APOC1P02654 83 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
SCFD2-201ENST00000388940 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
SCFD2-201ENST00000388940 OR2F1Q13607 317 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 ARRDC1Q8N5I2 433 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 OR2I1PQ8NGU4 316 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 COQ8AQ8NI60 647 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 C10orf35Q96D05 121 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
SCFD2-201ENST00000388940 FOXD3Q9UJU5 478 aaPredicted RBP13.15□□□□□ -0.3
SCFD2-201ENST00000388940 DKKL1Q9UK85 242 aa13.15□□□□□ -0.3
SCFD2-201ENST00000388940 NSG1A0A0A6YYJ2 146 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 MFNGO00587 321 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 DUS4LO95620 317 aaKnown RBP13.15□□□□□ -0.31
SCFD2-201ENST00000388940 CER1O95813 267 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 IGHEP01854 428 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 PMP2P02689 132 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 CRIP3Q6Q6R5 217 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 TMEM156Q8N614 296 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.31
SCFD2-201ENST00000388940 TERB2Q8NHR7 220 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 PP6455Q8WZ26 134 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 GPER1Q99527 375 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 CDX2Q99626 313 aaPredicted RBP13.15□□□□□ -0.31
SCFD2-201ENST00000388940 PIGQQ9BRB3 760 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 PDCD10Q9BUL8 212 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 HPF1Q9NWY4 346 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 FLVCR1Q9Y5Y0 555 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 KCNMB2Q9Y691 235 aa13.15□□□□□ -0.31
SCFD2-201ENST00000388940 MED12Q93074 2177 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 DBX1A6NMT0 343 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 GJE1A6NN92 205 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 DHRS3O75911 302 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 WDPCPO95876 746 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 FOLR3P41439 243 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 MICBQ29980 383 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 RSPO1Q2MKA7 263 aaPredicted RBP13.14□□□□□ -0.31
SCFD2-201ENST00000388940 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 ST8SIA4Q92187 359 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 CXorf58Q96LI9 332 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 SF3B5Q9BWJ5 86 aaKnown RBP13.14□□□□□ -0.31
SCFD2-201ENST00000388940 BANF2Q9H503 90 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 IFT22Q9H7X7 185 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 FN3KRPQ9HA64 309 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 PFDN2Q9UHV9 154 aa13.14□□□□□ -0.31
SCFD2-201ENST00000388940 A0A0J9YW62 118 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 TOR1AO14656 332 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 CRTAPO75718 401 aaPredicted RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ZP3P21754 424 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 PTGFRP43088 359 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 KISS1Q15726 138 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 C20orf196Q8IYI0 205 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 TMEM185AQ8NFB2 350 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 SGCZQ96LD1 299 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 UCN2Q96RP3 112 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 SLC25A32Q9H2D1 315 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 SESN1Q9Y6P5 492 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 C5orf63A6NC05 138 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 OR5H15A6NDH6 313 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 RAD51DO75771 328 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 LIPCP11150 499 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ZNF84P51523 738 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 MRPS34P82930 218 aaKnown RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 GFOD2Q3B7J2 385 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 SLC16A14Q7RTX9 510 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 MAML2Q8IZL2 1156 aaPredicted RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 LINC00518Q8N0U6 118 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 EIF4E3Q8N5X7 224 aaKnown RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 PPP1R1CQ8WVI7 109 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ARHGAP5-AS1Q96IT6 56 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
SCFD2-201ENST00000388940 ZC4H2Q9NQZ6 224 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 GPR132Q9UNW8 380 aa13.13□□□□□ -0.31
SCFD2-201ENST00000388940 IGHV3-15A0A0B4J1V0 119 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 A0A1W2PP11 408 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 A8MXK9 166 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 F5H5K5 113 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 HSD17B13Q7Z5P4 300 aaPredicted RBP13.12□□□□□ -0.31
SCFD2-201ENST00000388940 MARCH1Q8TCQ1 289 aa13.12□□□□□ -0.31
SCFD2-201ENST00000388940 ST8SIA2Q92186 375 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms