RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SLIT2O94813 1529 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 TRPM6Q9BX84 2022 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 FHOD3Q2V2M9 1422 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 LCTP09848 1927 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 MROH5Q6ZUA9 1318 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 KIF16BQ96L93 1317 aa-0.15□□□□□ -2.43
SNORD28-201ENST00000384706 ABCC9O60706 1549 aa-0.16□□□□□ -2.43
SNORD28-201ENST00000384706 CACNA1BQ00975 2339 aa-0.16□□□□□ -2.43
SNORD28-201ENST00000384706 ARHGAP32A7KAX9 2087 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV3-7A0A075B6H7 116 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV3D-7A0A0C4DH55 119 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV3OR2-268A0A0C4DH90 116 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 A0A0G2JQZ4 141 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 A0A1B0GTI1 187 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 BTBD17A6NE02 478 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PDZK1P1A8MUH7 402 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ODF3BA8MYP8 253 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 F8VP50 259 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 SMKR1H3BMG3 65 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PLPP3O14495 311 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TP53I11O14683 189 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TRAPPC3O43617 180 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FKBP6O75344 327 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CLPXO76031 633 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CXorf1O96002 111 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 AK1P00568 194 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV1D-33P01593 117 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 IGKV1-33P01594 117 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 SERPIND1P05546 499 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ETS2P15036 469 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 RPA2P15927 270 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 HTR1DP28221 377 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 HNRNPH3P31942 346 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 GGT2P36268 569 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CFHR2P36980 270 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 SSR1P43307 286 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CAMLGP49069 296 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CCT3P49368 545 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CDH6P55285 790 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 STXBP1P61764 594 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 RPS15P62841 145 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 LIPEQ05469 1076 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FGL1Q08830 312 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 DDX39BQ13838 428 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ENDOGQ14249 297 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TGFBIQ15582 683 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF829Q3KNS6 432 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FAM201AQ5SY85 155 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 HHATQ5VTY9 493 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 UBE2UQ5VVX9 321 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 MLIPQ5VWP3 458 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 MFSD14CQ5VZR4 134 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CNSTQ6PJW8 725 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TMPRSS11AQ6ZMR5 421 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TRMT10CQ7L0Y3 403 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 VN1R4Q7Z5H5 301 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 COA5Q86WW8 74 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PSTKQ8IV42 348 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ITPRIPQ8IWB1 547 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 C3orf22Q8N5N4 141 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 MS4A15Q8N5U1 240 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FAM83FQ8NEG4 500 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 OR6Q1Q8NGQ2 317 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 OR1L6Q8NGR2 347 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 OR51F2Q8NH61 342 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 MFSD8Q8NHS3 518 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PLPPR1Q8TBJ4 325 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 OR51E1Q8TCB6 317 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ISG20Q96AZ6 181 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 S100PBPQ96BU1 408 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 SENP8Q96LD8 212 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PPP1R36Q96LQ0 422 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TCEANC2Q96MN5 208 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ODF3Q96PU9 254 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM237Q96Q45 408 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PSKH2Q96QS6 385 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TIMM21Q9BVV7 248 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 KRT23Q9C075 422 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TOLLIPQ9H0E2 274 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 HSD3B7Q9H2F3 369 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TDRD3Q9H7E2 651 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PLEKHF2Q9H8W4 249 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FGF20Q9NP95 211 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FARSBQ9NSD9 589 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM38BQ9NVV0 291 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 DCAF16Q9NXF7 216 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TERF2IPQ9NYB0 399 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 TAS2R9Q9NYW1 312 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 LSM7Q9UK45 103 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PTBP2Q9UKA9 531 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ADAM28Q9UKQ2 775 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PIN4Q9Y237 131 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 SYNE1Q8NF91 8797 aaKnown RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 KIAA2026Q5HYC2 2103 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 CACNA1SQ13698 1873 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 ELP1O95163 1332 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 FREM1Q5H8C1 2179 aa-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 DENND4BO75064 1496 aaPredicted RBP-0.16□□□□□ -2.44
SNORD28-201ENST00000384706 PLXNB3Q9ULL4 1909 aa-0.17□□□□□ -2.44
SNORD28-201ENST00000384706 NCOA6Q14686 2063 aaPredicted RBP-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms