RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TMEM33P57088 247 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 FMODQ06828 376 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 RNF144BQ7Z419 303 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 STX12Q86Y82 276 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 BCORP1Q8N888 145 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 EXD3Q8N9H8 876 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 C16orf52Q8NHV5 167 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 DGAT2Q96PD7 388 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 PNO1Q9NRX1 252 aaKnown RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 EHFQ9NZC4 300 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 TMEM184BQ9Y519 407 aaPredicted RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 MTCH2Q9Y6C9 303 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 ZNF729A6NN14 1252 aaPredicted RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 F8VVB4 439 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 F8VWA3 439 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
SDC1-202ENST00000381150 HCKP08631 526 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CX3CR1P49238 355 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 SP6Q3SY56 376 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 GFI1BQ5VTD9 330 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 RLN3Q8WXF3 142 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 KLHDC7BQ96G42 594 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 CDC6Q99741 560 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 SLC2A8Q9NY64 477 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
SDC1-202ENST00000381150 SOCS1O15524 211 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 OPN1LWP04000 364 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 H2BFMP0C1H6 154 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 FABP4P15090 132 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 NDUFB7P17568 137 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 RAP1AP62834 184 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 TOMM34Q15785 309 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 Q3ZCU0 254 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 C10orf91Q5T1B1 145 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 C17orf78Q8N4C9 275 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 SGK3Q96BR1 496 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 BSCL2Q96G97 398 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 FAM71F1Q96KD3 344 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 GPR61Q9BZJ8 451 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 OR11A1Q9GZK7 315 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 C5orf66Q9H5L9 145 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 OR52A1Q9UKL2 312 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 SYT7O43581 403 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 CLPSP04118 112 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 SELLP14151 372 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 AGAP20933 346 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 FASLGP48023 281 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 DHPSP49366 369 aaPredicted RBP12.3□□□□□ -0.44
SDC1-202ENST00000381150 SOHLH1Q5JUK2 328 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 TMEM244Q5VVB8 128 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 ARMC6Q6NXE6 501 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 LRFN5Q96NI6 719 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 S100A13Q99584 98 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 FOXQ1Q9C009 403 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 CRLF2Q9HC73 371 aa12.3□□□□□ -0.44
SDC1-202ENST00000381150 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 PET100P0DJ07 73 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 OMGP23515 440 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 BLKP51451 505 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 ZNF260Q3ZCT1 412 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 EEF1A1P5Q5VTE0 462 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 CCDC54Q8NEL0 328 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 REEP6Q96HR9 211 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 G6PC3Q9BUM1 346 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 HIF3AQ9Y2N7 669 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 FCGR3AP08637 254 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SLC25A1P53007 311 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 FUT7Q11130 342 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 GAMTQ14353 236 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 RAB22AQ9UL26 194 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 WIPF3A6NGB9 483 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 PHYHO14832 338 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 VSIG8P0DPA2 414 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 CD37P11049 281 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 NAAAQ02083 359 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 DMWDQ09019 674 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 HAGHQ16775 308 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 GLIPR1L1Q6UWM5 242 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 UNQ6494/PRO21346Q6UXR6 183 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 TMEM182Q6ZP80 229 aaPredicted RBP12.29□□□□□ -0.44
SDC1-202ENST00000381150 SUMF2Q8NBJ7 301 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 ZNF524Q96C55 264 aa12.29□□□□□ -0.44
SDC1-202ENST00000381150 SAT2Q96F10 170 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms