RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 ABHD6Q9BV23 337 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 MAGIXQ9H6Y5 334 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 REEP1Q9H902 201 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 MED20Q9H944 212 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 RNPEPL1Q9HAU8 725 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 CMC2Q9NRP2 79 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 DNAJC27Q9NZQ0 273 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 PDP1Q9P0J1 537 aaPredicted RBP13.91□□□□□ -0.18
SMN2-201ENST00000380741 ZNF319Q9P2F9 582 aa13.91□□□□□ -0.18
SMN2-201ENST00000380741 CLPSL1A2RUU4 121 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 FAM183AA6NL82 134 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 DCTN3O75935 186 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 MUC1P15941 1255 aaPredicted RBP13.9□□□□□ -0.18
SMN2-201ENST00000380741 ZNF121P58317 390 aaPredicted RBP13.9□□□□□ -0.18
SMN2-201ENST00000380741 GFOD2Q3B7J2 385 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 CDONQ4KMG0 1287 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 WDR38Q5JTN6 314 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 OR2T5Q6IEZ7 315 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 BRICD5Q6PL45 260 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 VMO1Q7Z5L0 202 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 PIGWQ7Z7B1 504 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 FAM216BQ8N7L0 139 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 SCCPDHQ8NBX0 429 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 OR2T29Q8NH02 315 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 DYRK2Q92630 601 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 SEH1LQ96EE3 360 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 INTS14Q96SY0 518 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 CITED1Q99966 193 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 NIPSNAP1Q9BPW8 284 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 CNTD2Q9H8S5 307 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 SP140LQ9H930 580 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 KPTNQ9Y664 436 aa13.9□□□□□ -0.18
SMN2-201ENST00000380741 ATP8B1O43520 1251 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 GPR137BO60478 399 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 TIPRLO75663 272 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 APOC1P02654 83 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 GSTT1P30711 240 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 IER3P46695 156 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 GSK3AP49840 483 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 GYS2P54840 703 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 RPL15P61313 204 aaKnown RBP13.89□□□□□ -0.19
SMN2-201ENST00000380741 PDLIM3Q53GG5 364 aaPredicted RBP13.89□□□□□ -0.19
SMN2-201ENST00000380741 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 SLC36A1Q7Z2H8 476 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 DHFR2Q86XF0 187 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 LDLRAD3Q86YD5 345 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 IQCF1Q8N6M8 205 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 OR52H1Q8NGJ2 320 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 PAPOLGQ9BWT3 736 aaKnown RBP13.89□□□□□ -0.19
SMN2-201ENST00000380741 OR10A2Q9H208 303 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 BRD7Q9NPI1 651 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 ONECUT1Q9UBC0 465 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 RHBDD3Q9Y3P4 386 aa13.89□□□□□ -0.19
SMN2-201ENST00000380741 A0A1B0GVI7 797 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 B2RBV5 119 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 ACOT8O14734 319 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 CDIPTO14735 213 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 CFL1P23528 166 aaKnown RBP13.88□□□□□ -0.19
SMN2-201ENST00000380741 GNALP38405 381 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 OPRL1P41146 370 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 MNAT1P51948 309 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 KRTAP10-3P60369 221 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 GNGT1P63211 74 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 IKZF1Q13422 519 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 MIDNQ504T8 468 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 TIGD4Q8IY51 512 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 LY6G5BQ8NDX9 201 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 CSNK2A3Q8NEV1 391 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 OR10G2Q8NGC3 310 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 TEX47Q8TBZ9 253 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 OTULINQ96BN8 352 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 C12orf43Q96C57 262 aaKnown RBP13.88□□□□□ -0.19
SMN2-201ENST00000380741 ITPKCQ96DU7 683 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 TLNRD1Q9H1K6 362 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 MUC13Q9H3R2 512 aa13.88□□□□□ -0.19
SMN2-201ENST00000380741 GLCEO94923 617 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 SELLP14151 372 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 AMY2BP19961 511 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 NAA10P41227 235 aaPredicted RBP13.87□□□□□ -0.19
SMN2-201ENST00000380741 GMFBP60983 142 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 MS4A2Q01362 244 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 PRB3Q04118 309 aaPredicted RBP13.87□□□□□ -0.19
SMN2-201ENST00000380741 OCLNQ16625 522 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 FAM98BQ52LJ0 330 aaKnown RBP13.87□□□□□ -0.19
SMN2-201ENST00000380741 STUMQ69YW2 141 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 CD300LDQ6UXZ3 194 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 RHOUQ7L0Q8 258 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 SHFQ7M4L6 423 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 ARHGAP24Q8N264 748 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 GALNT4Q8N4A0 578 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 OR5T2Q8NGG2 359 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 LINC01006Q8NI28 216 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 CCT8L2Q96SF2 557 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 MICU1Q9BPX6 476 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 OR51V1Q9H2C8 321 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 SEMA6AQ9H2E6 1030 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 RGCCQ9H4X1 137 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 SIRT7Q9NRC8 400 aa13.87□□□□□ -0.19
SMN2-201ENST00000380741 PRPF19Q9UMS4 504 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms