RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MMP28Q9H239 520 aa6.43□□□□□ -1.38
CCDC171-201ENST00000380701 IL20Q9NYY1 176 aa6.43□□□□□ -1.38
CCDC171-201ENST00000380701 A0A1B0GUH1 482 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 NGFRP08138 427 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR4A8P0C604 315 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR5G3P0C626 314 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CNN1P51911 297 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CLDN12P56749 244 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 MCCD1P59942 119 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PPP1CBP62140 327 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC35A2P78381 396 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ASAH1Q13510 395 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF239Q16600 458 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR10AD1Q8NGE0 317 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 YIPF5Q969M3 257 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 WDR61Q9GZS3 305 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CES1P1Q9UKY3 287 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC22A13Q9Y226 551 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CACNA1SQ13698 1873 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TUBAL3A6NHL2 446 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 AHRRA9YTQ3 701 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SPRY3O43610 288 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 GSTZ1O43708 216 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 FBXO24O75426 580 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PEX11BO96011 259 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SPP1P10451 314 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF83P51522 516 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 B4GALNT1Q00973 533 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 HIST2H3PS2Q5TEC6 136 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC25A42Q86VD7 318 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TMEM229BQ8NBD8 167 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 APH1BQ8WW43 257 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC7A6Q92536 515 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 DUSP21Q9H596 190 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ONECUT1Q9UBC0 465 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF225Q9UK10 706 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 MYH7P12883 1935 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PCP4L1A6NKN8 68 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 LANCL1O43813 399 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 FADS1O60427 444 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 B3GALT4O96024 378 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 EMDP50402 254 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ISL1P61371 349 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 HOXA4Q00056 320 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 EBPQ15125 230 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ATP6V1FQ16864 119 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PRICKLE4Q2TBC4 344 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TMEM30BQ3MIR4 351 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 DCAF10Q5QP82 559 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 DNAJC5GQ8N7S2 189 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZBTB34Q8NCN2 500 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 C2orf50Q96LR7 162 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ALKBH3Q96Q83 286 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TMEM147Q9BVK8 224 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PECRQ9BY49 303 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC35D1Q9NTN3 355 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PDE4DIPQ5VU43 2346 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 NGFP01138 241 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 GZMHP20718 246 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CTGFP29279 349 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 AKR1C3P42330 323 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 GABRA6Q16445 453 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 BTNL8Q6UX41 500 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 NFAM1Q8NET5 270 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 HRH4Q9H3N8 390 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 BANF2Q9H503 90 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TMEM30AQ9NV96 361 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PLA2G3Q9NZ20 509 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TMED3Q9Y3Q3 217 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CRHP06850 196 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 COL9A1P20849 921 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 FCGR2CP31995 323 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZFP36L2P47974 494 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TAF9Q16594 264 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 SLC25A30Q5SVS4 291 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ADAM5Q6NVV9 412 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR51S1Q8NGJ8 323 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR5M9Q8NGP3 310 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 C10orf90Q96M02 699 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 RAB40CQ96S21 281 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 CYB5R1Q9UHQ9 305 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 NPIPB8E9PQR5 432 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 TSTD3H0UI37 97 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 F2RL2O00254 374 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PPP1R2P9O14990 202 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 NDUFA2O43678 99 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 LALBAP00709 142 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PCSK6P29122 969 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 KIR2DL1P43626 348 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 ZNF273Q14593 569 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 POU4F3Q15319 338 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 C1orf185Q5T7R7 199 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 RPL7L1Q6DKI1 246 aaKnown RBP6.42□□□□□ -1.38
CCDC171-201ENST00000380701 OR8G2PQ6IF36 304 aa6.42□□□□□ -1.38
CCDC171-201ENST00000380701 PWWP2BQ6NUJ5 590 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms