RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 LIPCP11150 499 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CCL1P22362 96 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 LSM6P62312 80 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 POU4F3Q15319 338 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GRK1Q15835 563 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 RAB11FIP2Q7L804 512 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GGNQ86UU5 652 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 BPIFB2Q8N4F0 458 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR2AK2Q8NG84 335 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 NPRL2Q8WTW4 380 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 PSMF1Q92530 271 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 MRGPRFQ96AM1 343 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CNTNAP3BQ96NU0 1288 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CNTNAP3Q9BZ76 1288 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 FBXO4Q9UKT5 387 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 MRPS28Q9Y2Q9 187 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 TMEM82A0PJX8 343 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR14I1A6ND48 311 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SOCS1O15524 211 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SSX5O60225 188 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 VAMP5O95183 116 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 P04436 131 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR4E1P0C645 316 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF35P13682 527 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SLC6A9P48067 706 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF133P52736 654 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CLDN15P56746 228 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GNG2P59768 71 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GRB2P62993 217 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CSNK2A1P68400 391 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 CHAF1BQ13112 559 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF124Q15973 351 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 WIPI1Q5MNZ9 446 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ACER2Q5QJU3 275 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 PLA2G2CQ5R387 149 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ATPAF1Q5TC12 328 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 C1QL2Q7Z5L3 287 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZNF584Q8IVC4 421 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR8H3Q8N146 312 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 BEST3Q8N1M1 668 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 KDF1Q8NAX2 398 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR5D18Q8NGL1 313 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR14L1PQ8NHC6 308 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ROBO4Q8WZ75 1007 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 TAAR9Q96RI9 348 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 NAA11Q9BSU3 229 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 LPAR5Q9H1C0 372 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SLCO5A1Q9H2Y9 848 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 P4HTMQ9NXG6 502 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OPN4Q9UHM6 478 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 KCNK7Q9Y2U2 307 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 UBE2QL1A1L167 161 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 C9orf172C9J069 976 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SLC22A5O76082 557 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 MPIG6BO95866 241 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 HCKP08631 526 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GUCA1AP43080 201 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 EXOSC2Q13868 293 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 PLAC9Q5JTB6 97 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 RAB12Q6IQ22 244 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 H3F3CQ6NXT2 135 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 FOXL2NBQ6ZUU3 175 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 DOK3Q7L591 496 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZBTB34Q8NCN2 500 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZBTB44Q8NCP5 570 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 GJC3Q8NFK1 279 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 OR10R2Q8NGX6 335 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SSC4DQ8WTU2 575 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 TNFAIP8L1Q8WVP5 186 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ELMOD3Q96FG2 381 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 PGAM5Q96HS1 289 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ZPBPQ9BS86 351 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 ULBP2Q9BZM5 246 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 SPRY4Q9C004 299 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 FOXJ2Q9P0K8 574 aa6.99□□□□□ -1.29
PDLIM5-204ENST00000380176 TRBV23-1A0A0A0MS06 115 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CXCL13O43927 109 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 TRAPPC6AO75865 159 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 IGLV3-1P01715 115 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 MELTFP08582 738 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 SP9P0CG40 484 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CTSSP25774 331 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 SRD5A2P31213 254 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 TMEM50BP56557 158 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 RAP2BP61225 183 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 HIST1H3AP68431 136 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 SNAI3Q3KNW1 292 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 HIST2H3PS2Q5TEC6 136 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 SPINK14Q6IE38 97 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 HIST2H3AQ71DI3 136 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 PGAP1Q75T13 922 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 C20orf196Q8IYI0 205 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 OR10Z1Q8NGY1 313 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 VSIG4Q9Y279 399 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 ZFHX4Q86UP3 3567 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CCDC187A0A096LP49 1063 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 CDC14BO60729 498 aa6.98□□□□□ -1.29
PDLIM5-204ENST00000380176 IGHEP01854 428 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms