RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PLCXD3Q63HM9 321 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 FBXW12Q6X9E4 464 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 C2orf50Q96LR7 162 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF71Q9NQZ8 489 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-202ENST00000379826 OR6C65A6NJZ3 312 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 ITGB2P05107 769 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 DBHP09172 617 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 LAP3P28838 519 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 OPRM1P35372 400 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 GPR3P46089 330 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 HNF4GQ14541 408 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 MOB3CQ70IA8 216 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 IFT22Q9H7X7 185 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 MTCL1Q9Y4B5 1905 aaKnown RBP10.15□□□□□ -0.78
SMAD9-202ENST00000379826 LOC101059948A0A1B0GTJ6 334 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 ZNF891A8MT65 544 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-202ENST00000379826 PRRG2O14669 202 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 TPPPO94811 219 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 FGF2P09038 288 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 ZDHHC22Q8N966 263 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 OR14K1Q8NGZ2 314 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 SYT3Q9BQG1 590 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 PLXNB3Q9ULL4 1909 aa10.15□□□□□ -0.78
SMAD9-202ENST00000379826 UMAD1C9J7I0 102 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 BGLAPP02818 100 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 ASAH2BP0C7U1 165 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SPP1P10451 314 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 PIGCQ92535 297 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 C8orf44Q96CB5 159 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 METTL9Q9H1A3 318 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 TRIM77I1YAP6 450 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 ABCD4O14678 606 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SOCS1O15524 211 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 OR2A4O95047 310 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 CHRM2P08172 466 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SMIM10L1P0DMW3 83 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SCAND1P57086 179 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 HES3Q5TGS1 186 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 GPR157Q5UAW9 335 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 RXFP4Q8TDU9 374 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 PTPMT1Q8WUK0 201 aaPredicted RBP10.15□□□□□ -0.79
SMAD9-202ENST00000379826 HAS2Q92819 552 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 SMIM10Q96HG1 83 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 OR2A7Q96R45 310 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 NPTNQ9Y639 398 aa10.15□□□□□ -0.79
SMAD9-202ENST00000379826 KCNJ3P48549 501 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SP6Q3SY56 376 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 RPL7L1Q6DKI1 246 aaKnown RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 ARL5BQ96KC2 179 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SARGQ9BW04 601 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SHARPINQ9H0F6 387 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 OR51B6Q9H340 312 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 NGBQ9NPG2 151 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 ZNF205O95201 554 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 GABRG2P18507 467 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 KIR2DL1P43626 348 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 NUBP1P53384 320 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SRYQ05066 204 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 FZD2Q14332 565 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 ZFP62Q8NB50 900 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SCGB1C1Q8TD33 95 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 GPBAR1Q8TDU6 330 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 TRAV20A0A0B4J274 112 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SPTY2D1-AS1A0A0U1RR47 76 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 OR6C76A6NM76 312 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SPRY1O43609 319 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 FOXS1O43638 330 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 CDC14BO60729 498 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SFT2D2O95562 160 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 IFNA5P01569 189 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 NQO2P16083 231 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 MPGP29372 298 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 RAB5CP51148 216 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 PRSS12P56730 875 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 C9orf135Q5VTT2 229 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 JMJD6Q6NYC1 403 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 SLC22A25Q6T423 547 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 OR9K2Q8NGE7 335 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 HELZP42694 1942 aaKnown RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 RER1O15258 196 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 DAOP14920 347 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 UBE2KP61086 200 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 NKX6-1P78426 367 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 CLEC18BQ6UXF7 455 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 BEND4Q6ZU67 534 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 WDSUB1Q8N9V3 476 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 OR6C1Q96RD1 312 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 NAA11Q9BSU3 229 aaPredicted RBP10.14□□□□□ -0.79
SMAD9-202ENST00000379826 CACNA1CQ13936 2221 aa10.14□□□□□ -0.79
SMAD9-202ENST00000379826 RAB19A4D1S5 217 aa10.13□□□□□ -0.79
SMAD9-202ENST00000379826 ICAM2P13598 275 aa10.13□□□□□ -0.79
SMAD9-202ENST00000379826 APOBEC1P41238 236 aaKnown RBP10.13□□□□□ -0.79
SMAD9-202ENST00000379826 LIN37Q96GY3 246 aaPredicted RBP10.13□□□□□ -0.79
SMAD9-202ENST00000379826 SRPK3Q9UPE1 567 aa10.13□□□□□ -0.79
SMAD9-202ENST00000379826 TRBV5-7A0A0A0MS05 114 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms