RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 A0A1W2PP11 408 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 CDC14BO60729 498 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 TGM6O95932 706 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 HLA-HP01893 362 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 CD79AP11912 226 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 PRF1P14222 555 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 ANXA7P20073 488 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 ACKR3P25106 362 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 RIPPLY1Q0D2K3 151 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 OR2W3Q7Z3T1 314 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 AQP3Q92482 292 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 RNF122Q9H9V4 155 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 KLK13Q9UKR3 277 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 CFAP47Q6ZTR5 3102 aa12.88□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 RPL36A-HNRNPH2H7BZ11 118 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 M0QYG6 137 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 PRAF2O60831 178 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 RAB3DO95716 219 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 HPXP02790 462 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 RLN1P04808 185 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 CPN1P15169 458 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 PTGFRP43088 359 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 RAD52P43351 418 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 CLN3Q13286 438 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 P4HA3Q7Z4N8 544 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 CPEB3Q8NE35 698 aaKnown RBP12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 OR11H7Q8NGC8 314 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 NUDCD2Q8WVJ2 157 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 DLL3Q9NYJ7 618 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF407Q9C0G0 2248 aa12.87□□□□□ -0.35
RAB3IP-203ENST00000378809 WIPF3A6NGB9 483 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF736B4DX44 427 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 ICMTO60725 284 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 CSN2P05814 226 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 UBBP0CG47 229 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 METTL11BQ5VVY1 283 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 OR10K1Q8NGX5 313 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 C1orf147Q96MC9 270 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 SEC22CQ9BRL7 303 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 URM1Q9BTM9 101 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 CST11Q9H112 138 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF69Q9UC07 566 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 PRSS50Q9UI38 385 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 A0A1B0GUH1 482 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 FAM230AA0A1W2PPH8 454 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 CXCL3P19876 107 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 SERPINA2P20848 420 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 MTCP1P56278 107 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF92Q03936 586 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 Q6ZSR3 168 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 RTN4RL2Q86UN3 420 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 CDH24Q86UP0 819 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 OR4S1Q8NGB4 309 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 SSC4DQ8WTU2 575 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 RAB3CQ96E17 227 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 BOLA1Q9Y3E2 137 aa12.86□□□□□ -0.35
RAB3IP-203ENST00000378809 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 ZFHX2Q9C0A1 2572 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 A0A0A6YYD4 124 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 C5orf49A4QMS7 147 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 SOCS1O15524 211 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 PLATP00750 562 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 C1QBP02746 253 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 AMY2AP04746 511 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 CHRM2P08172 466 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 ANXA3P12429 323 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 CCL2P13500 99 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 AGTR1P30556 359 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 GNG2P59768 71 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 GVQW1Q8N7I0 195 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 TINAGL1Q9GZM7 467 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 RGCCQ9H4X1 137 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 ZNF391Q9UJN7 358 aa12.85□□□□□ -0.35
RAB3IP-203ENST00000378809 DHRS7CA6NNS2 312 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 TM4SF5O14894 197 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-203ENST00000378809 GSK3AP49840 483 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 278.8 ms