RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CTDSP1Q9GZU7 261 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 LINC00597Q9H2U6 94 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PDFQ9HBH1 243 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 A0A1B0GVT2 93 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 HKR1P10072 659 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TFPIP10646 304 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 FBLP22087 321 aaKnown RBP10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF587Q96SQ5 575 aaPredicted RBP10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PRRX2Q99811 253 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 SLC31A1O15431 190 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 KCNAB3O43448 404 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 PPBPP02775 128 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CD5P06127 495 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 GALR1P47211 349 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 ZFP36L2P47974 494 aaKnown RBP10.61□□□□□ -0.71
NPHP4-202ENST00000378161 GLIPR1P48060 266 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 BAXQ07812 192 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 MMDQ15546 238 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 SPATA45Q537H7 98 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 CYB561A3Q8NBI2 242 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 OR51D1Q8NGF3 324 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 OR2Y1Q8NGV0 311 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 GPR148Q8TDV2 347 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 MUCL1Q96DR8 90 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 NMNAT2Q9BZQ4 307 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 WDR13Q9H1Z4 485 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 MED20Q9H944 212 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 Q9N2K0 584 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
NPHP4-202ENST00000378161 TRBV5-3A0A0A0MS03 114 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF749O43361 778 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 CNIH1O95406 144 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 TBX6O95947 436 aaPredicted RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SGSHP51688 502 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ID2Q02363 134 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 PPP1R1AQ13522 171 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 PDGFRLQ15198 375 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 HMGN2P46Q86SG4 172 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 GBGT1Q8N5D6 347 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF485Q8NCK3 441 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KNL1Q8NG31 2342 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF480Q8WV37 535 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 FAM46BQ96A09 425 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SMIM8Q96KF7 97 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 MBNL1Q9NR56 388 aaKnown RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 RNF222A6NCQ9 220 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF878C9JN71 531 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 J3QW42 95 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 K7EQM0 130 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 USF1P22415 310 aaPredicted RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 MRPS34P82930 218 aaKnown RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 MPV17LQ2QL34 196 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KRTCAP3Q53RY4 240 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 WDFY1Q8IWB7 410 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 OR4K14Q8NGD5 310 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KLK6Q92876 244 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 RNF186Q9NXI6 227 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 FBXL17Q9UF56 701 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 APOBEC3BQ9UH17 382 aaKnown RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KCNK6Q9Y257 313 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 HLA-HP01893 362 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 PGCP20142 388 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 GUCA2AQ02747 115 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SRSF5Q13243 272 aaKnown RBP10.6□□□□□ -0.71
NPHP4-202ENST00000378161 COX20Q5RI15 118 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KIAA0895LQ68EN5 471 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 ZNF880Q6PDB4 577 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 KIRREL2Q6UWL6 708 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SYT13Q7L8C5 426 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM25Q86YD3 366 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SLC35F2Q8IXU6 374 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 C10orf111Q8N326 155 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 RCBTB1Q8NDN9 531 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 OR5H2Q8NGV7 314 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SMIM7Q9BQ49 75 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 HINT2Q9BX68 163 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 SLC5A7Q9GZV3 580 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 TMEM38AQ9H6F2 299 aa10.6□□□□□ -0.71
NPHP4-202ENST00000378161 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 AMY2BP19961 511 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ID4P47928 161 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 SLC6A8P48029 635 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 OR4C11Q6IEV9 310 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 HSD11B1LQ7Z5J1 315 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 C12orf76Q8N812 135 aaPredicted RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 ZMYND19Q96E35 227 aaPredicted RBP10.59□□□□□ -0.71
NPHP4-202ENST00000378161 MYEOVQ96EZ4 313 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 PELI2Q9HAT8 420 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 C5AR2Q9P296 337 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 MSRAQ9UJ68 235 aa10.59□□□□□ -0.71
NPHP4-202ENST00000378161 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms