RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ASB17Q8WXJ9 295 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 TBX5Q99593 518 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 PKP2Q99959 881 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 MICU1Q9BPX6 476 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 RBM4BQ9BQ04 359 aaKnown RBP9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 PPP1R3EQ9H7J1 279 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 CLN8Q9UBY8 286 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 ARHGAP32A7KAX9 2087 aa9.68□□□□□ -0.86
SMARCE1-203ENST00000377808 IGHV3OR15-7A0A075B7D8 119 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 TRAV38-1A0A0B4J264 116 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PPIAL4CA0A0B4J2A2 164 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 OOEPA6NGQ2 149 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 A8MXK9 166 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PRR32B1ATL7 298 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF670-ZNF695F2Z2N8 137 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 LGALS8O00214 317 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PHYHO14832 338 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 APOL3O95236 402 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 GYPAP02724 150 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF12P17014 697 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ATP6V1E1P36543 226 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 POLR2IP36954 125 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 CSNK2BP67870 215 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 IL5RAQ01344 420 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 POU4F2Q12837 409 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PRDX4Q13162 271 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 AADACL4Q5VUY2 407 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ZFP1Q6P2D0 407 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF322Q6U7Q0 402 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PLEKHG7Q6ZR37 379 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 THAP5Q7Z6K1 395 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF679Q8IYX0 411 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 OR1M1Q8NGA1 313 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 LRRC29Q8WV35 223 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 FAM71F1Q96KD3 344 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 LYZL4Q96KX0 146 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 HIST1H2AAQ96QV6 131 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 OR8B4Q96RC9 309 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 SLC6A7Q99884 636 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 RTL8AQ9BWD3 113 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 PBOV1Q9GZY1 135 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 ADGRL4Q9HBW9 690 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 FAM206AQ9NX38 181 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 INSIG2Q9Y5U4 225 aa9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 FBN1P35555 2871 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-203ENST00000377808 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 EI24O14681 340 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 MAGEB4O15481 346 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ADAM20O43506 726 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 EGR1P18146 543 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ACKR3P25106 362 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 CDC42P60953 191 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 MFGE8Q08431 387 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ZIK1Q3SY52 487 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 BCL2L15Q5TBC7 163 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 DEGS2Q6QHC5 323 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ZDHHC23Q8IYP9 409 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 OR51E1Q8TCB6 317 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 RNF170Q96K19 258 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 APOL4Q9BPW4 351 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 OSBPL10Q9BXB5 764 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 GABARAPL3Q9BY60 117 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ABCB9Q9NP78 766 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 TRIM36Q9NQ86 728 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 CLN6Q9NWW5 311 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 IMPAD1Q9NX62 359 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ERVK-18Q9QC07 812 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF391Q9UJN7 358 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 ATRQ13535 2644 aa9.66□□□□□ -0.86
SMARCE1-203ENST00000377808 WNK2Q9Y3S1 2297 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 IGHV2-70DA0A0C4DH43 119 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 CDIPTO14735 213 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF254O75437 659 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 RPP14O95059 124 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 VENTXO95231 258 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 PTBP3O95758 552 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 CPT2P23786 658 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 FPR2P25090 351 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 HTR1FP30939 366 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 MAP2K3P46734 347 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 ROM1Q03395 351 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 CEP78Q5JTW2 689 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 WDR25Q64LD2 544 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 C10orf67Q8IYJ2 551 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 GCSAMQ8N6F7 178 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 YIPF7Q8N8F6 280 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 SEMA6DQ8NFY4 1073 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 OR10H4Q8NGA5 316 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 RAB40AQ8WXH6 277 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 RPL3LQ92901 407 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 ITPKCQ96DU7 683 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 RAB3IPQ96QF0 476 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 MNTQ99583 582 aa9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 NUDT16L1Q9BRJ7 211 aaKnown RBP9.65□□□□□ -0.86
SMARCE1-203ENST00000377808 SUCNR1Q9BXA5 334 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms