RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 HMGN1P05114 100 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 CRYBA1P05813 215 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 ANXA8P13928 327 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 MMP9P14780 707 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 MDKP21741 143 aaPredicted RBP17.43■□□□□ 0.38
VSX1-201ENST00000376707 OMGP23515 440 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 CFL1P23528 166 aaKnown RBP17.43■□□□□ 0.38
VSX1-201ENST00000376707 POU1F1P28069 291 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 GNALP38405 381 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 OPRL1P41146 370 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 CDK5Q00535 292 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 POU4F2Q12837 409 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 TEX36Q5VZQ5 186 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 HS3ST5Q8IZT8 346 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 LRRC29Q8WV35 223 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 ZNF556Q9HAH1 456 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 RNPEPL1Q9HAU8 725 aa17.43■□□□□ 0.38
VSX1-201ENST00000376707 CENPVL3A0A0U1RRI6 287 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 FAM181BA6NEQ2 426 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 PRR23D1E9PI22 279 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 PRODHO43272 600 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 WIPF1O43516 503 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 DNAJC8O75937 253 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 ECDO95905 644 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 PRR23D2P0DMB1 279 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 ZNF121P58317 390 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 CBX1P83916 185 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 PDCD1Q15116 288 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 MICBQ29980 383 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 PLBD1Q6P4A8 553 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 Q6YL49 198 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 BTN2A1Q7KYR7 527 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 WDR86Q86TI4 376 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 ST8SIA4Q92187 359 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 PGAM5Q96HS1 289 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 FAM71F1Q96KD3 344 aaPredicted RBP17.42■□□□□ 0.38
VSX1-201ENST00000376707 AMELYQ99218 206 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 SLITRK2Q9H156 845 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 OR10A2Q9H208 303 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 OR51V1Q9H2C8 321 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 BRD7Q9NPI1 651 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 KAAG1Q9UBP8 84 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 DOCK11Q5JSL3 2073 aa17.42■□□□□ 0.38
VSX1-201ENST00000376707 hCG_38984A0A1B0GV85 526 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 TIPRLO75663 272 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 H2BFMP0C1H6 154 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 PRKACGP22612 351 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 GSK3AP49840 483 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 ARF6P62330 175 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 FIP1L1Q6UN15 594 aaKnown RBP17.41■□□□□ 0.38
VSX1-201ENST00000376707 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.41■□□□□ 0.38
VSX1-201ENST00000376707 FTMTQ8N4E7 242 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 ZNF454Q8N9F8 522 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 CSNK2A3Q8NEV1 391 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 OR1M1Q8NGA1 313 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 OTOSQ8NHW6 89 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 LHX4Q969G2 390 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 NRBF2Q96F24 287 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 PAPOLGQ9BWT3 736 aaKnown RBP17.41■□□□□ 0.38
VSX1-201ENST00000376707 SIRPDQ9H106 197 aa17.41■□□□□ 0.38
VSX1-201ENST00000376707 MELTFP08582 738 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 MUC1P15941 1255 aaPredicted RBP17.4■□□□□ 0.38
VSX1-201ENST00000376707 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
VSX1-201ENST00000376707 CSNK2BP67870 215 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 SNCBQ16143 134 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 C11orf53Q8IXP5 236 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 TMEM86BQ8N661 226 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 DNAJC9Q8WXX5 260 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 CCL13Q99616 98 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 CHIAQ9BZP6 476 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 RGCCQ9H4X1 137 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 SLC25A19Q9HC21 320 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 ACOXLQ9NUZ1 547 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 RHBDD3Q9Y3P4 386 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 MMP24Q9Y5R2 645 aa17.4■□□□□ 0.38
VSX1-201ENST00000376707 IGHV1-69DA0A0B4J2H0 117 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 A0A1B0GUS0 222 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 ANXA2P2A6NMY6 339 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 GSC2O15499 205 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 FCN3O75636 299 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 IGHV1-69P01742 117 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 SLC2A5P22732 501 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 RAG2P55895 527 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 IL5RAQ01344 420 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 KLHL12Q53G59 568 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 WDR38Q5JTN6 314 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 SLC35D3Q5M8T2 416 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 WDR82Q6UXN9 313 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 SLC36A1Q7Z2H8 476 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 CPOQ8IVL8 374 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 OR4F5Q8NH21 305 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 SSMEM1Q8WWF3 244 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 CADM1Q9BY67 442 aaKnown RBP17.39■□□□□ 0.37
VSX1-201ENST00000376707 PPP1R3EQ9H7J1 279 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 CNTD2Q9H8S5 307 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 BEX1Q9HBH7 125 aa17.39■□□□□ 0.37
VSX1-201ENST00000376707 ZNF319Q9P2F9 582 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms