RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 GABREP78334 506 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ASCL4Q6XD76 172 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 MOB3CQ70IA8 216 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 OR13C9Q8NGT0 318 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 EXO5Q9H790 373 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 GPR84Q9NQS5 396 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SDHAF2Q9NX18 166 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 EDARQ9UNE0 448 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SIT1Q9Y3P8 196 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF716A6NP11 495 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SMAD9O15198 467 aaKnown RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SYNGR3O43761 229 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 AMY2AP04746 511 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 CLRN1P58418 232 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 RPS27AP62979 156 aaKnown RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SORDQ00796 357 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF528Q3MIS6 628 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 BEST3Q8N1M1 668 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 C12orf45Q8N5I9 185 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-202ENST00000376659 JAGN1Q8N5M9 183 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 AGBL5Q8NDL9 886 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 OR5B2Q96R09 309 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 UCN2Q96RP3 112 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 NELFAQ9H3P2 528 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM185BQ9H7F4 350 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 RASL12Q9NYN1 266 aa8.41□□□□□ -1.06
TRIM39-202ENST00000376659 SEC16AO15027 2179 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 LOC400499M0QZD8 3231 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 IGKV1-27A0A075B6S5 117 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 L7N2F9 121 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 ARPC5O15511 151 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 OPN1LWP04000 364 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF93P35789 620 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 GRB2P62993 217 aaKnown RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 C11orf87Q6NUJ2 197 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 GSG1LQ6UXU4 331 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 TFAP2EQ6VUC0 442 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 PGAP1Q75T13 922 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 ZNF248Q8NDW4 579 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 MRPS24Q96EL2 167 aaKnown RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 RNF126Q9BV68 326 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 METTL7AQ9H8H3 244 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 CYTL1Q9NRR1 136 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 NXT1Q9UKK6 140 aaKnown RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 GPR132Q9UNW8 380 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 MASP2O00187 686 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 CA11O75493 328 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 PDGFBP01127 241 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 FCER2P06734 321 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 GSTP1P09211 210 aaKnown RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 DSCR4P56555 118 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 S100A12P80511 92 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 TMEM42Q69YG0 159 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 DOK3Q7L591 496 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 HSD17B13Q7Z5P4 300 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-202ENST00000376659 BVESQ8NE79 360 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 OR9K2Q8NGE7 335 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 OR5D14Q8NGL3 314 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 OR13G1Q8NGZ3 307 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 FAM46BQ96A09 425 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 IFT46Q9NQC8 304 aa8.4□□□□□ -1.06
TRIM39-202ENST00000376659 OR6C6A6NF89 314 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 HPNP05981 417 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 CCL4P13236 92 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 MGMTP16455 207 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 SLC35A1P78382 337 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 TRA2AQ13595 282 aaKnown RBP eCLIP8.4□□□□□ -1.07
TRIM39-202ENST00000376659 SGCAQ16586 387 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 SNAI3Q3KNW1 292 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 STOML3Q8TAV4 291 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 SPACA5Q96QH8 159 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 PRRT1Q99946 306 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 CHST5Q9GZS9 411 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 GTF2A1LQ9UNN4 478 aa8.4□□□□□ -1.07
TRIM39-202ENST00000376659 DOCK10Q96BY6 2186 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 A0A1W2PNU3 283 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 H0YIZ8 118 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 SCGNO76038 276 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 DUS4LO95620 317 aaKnown RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 CYB5AP00167 134 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 SLC2A1P11166 492 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 ATP1B3P54709 279 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 PNLIPRP3Q17RR3 467 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 GLIPR1L1Q6UWM5 242 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 HDDC2Q7Z4H3 204 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 PPP1R32Q7Z5V6 425 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 ANGPTL5Q86XS5 388 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 SULF2Q8IWU5 870 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 BHLHE23Q8NDY6 225 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 OR2Y1Q8NGV0 311 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 LIN37Q96GY3 246 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 LIME1Q9H400 295 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM100Q9NV29 134 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF581Q9P0T4 197 aa8.39□□□□□ -1.07
TRIM39-202ENST00000376659 C19orf25Q9UFG5 118 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-202ENST00000376659 TECTAO75443 2155 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms