RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CAV2P51636 162 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 AFF3P51826 1226 aaKnown RBP12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 SNRPEP62304 92 aaKnown RBP12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 PEA15Q15121 130 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 C1orf210Q8IVY1 113 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 ADAMTS17Q8TE56 1095 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 ARHGAP5-AS1Q96IT6 56 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC5A7Q9GZV3 580 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 MRPS28Q9Y2Q9 187 aaKnown RBP12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 PCDHGA1Q9Y5H4 931 aa12.49□□□□□ -0.41
CLCNKA-202ENST00000375692 A0A1W2PQD3 144 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 COLCA2A8K830 154 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 FBXO24O75426 580 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 SHISA6Q6ZSJ9 500 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 RAB18Q9NP72 206 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CFAP54Q96N23 3096 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 NUDT19A8MXV4 375 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 PRSS44E7EML9 344 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 APOC1P02654 83 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 OPN1LWP04000 364 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CBR1P16152 277 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 TBPP20226 339 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CD80P33681 288 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 GPR85P60893 370 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 SWI5Q1ZZU3 235 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 DNM1P34Q6PK57 102 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 DEGS2Q6QHC5 323 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC25A45Q8N413 288 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 SMIM8Q96KF7 97 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 C1orf147Q96MC9 270 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 CDC6Q99741 560 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC26A1Q9H2B4 701 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 VDAC3Q9Y277 283 aa12.48□□□□□ -0.41
CLCNKA-202ENST00000375692 A6NIZ1 184 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 SFTPBP07988 381 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 ACAA1P09110 424 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF20P17024 532 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 SLC6A9P48067 706 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 RAP1BP61224 184 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 RAP1AP62834 184 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 HSF1Q00613 529 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 TLE3Q04726 772 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 OR10H5Q8NGA6 315 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 C5orf34Q96MH7 638 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF319Q9P2F9 582 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 MED12Q93074 2177 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 CNTRLQ7Z7A1 2325 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 H3BML4 177 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 M0R296 226 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 CDC14BO60729 498 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 BIDP55957 195 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 HNRNPKP61978 463 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 HABP2Q14520 560 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 LPAL2Q16609 132 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 C1orf189Q5VU69 101 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 LYSMD4Q5XG99 296 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 H1FNTQ75WM6 255 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 OR5AS1Q8N127 324 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 NANPQ8TBE9 248 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 THAP3Q8WTV1 239 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 FAM71F1Q96KD3 344 aaPredicted RBP12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 TAF9BQ9HBM6 251 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 FANCFQ9NPI8 374 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 MMACHCQ9Y4U1 282 aa12.47□□□□□ -0.41
CLCNKA-202ENST00000375692 ADAM10O14672 748 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 PIAS2O75928 621 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 HEXAP06865 529 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 CHRM2P08172 466 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 LYL1P12980 280 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 AMY2BP19961 511 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 HOXA6P31267 233 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 CDAP32320 146 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 F2RL1P55085 397 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 DCAF7P61962 342 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 ARFRP1Q13795 201 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 VAX1Q5SQQ9 334 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 AADACL3Q5VUY0 350 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 ZNF529Q6P280 563 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 LANCL3Q6ZV70 420 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 POC1AQ8NBT0 407 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 OR5D18Q8NGL1 313 aa12.46□□□□□ -0.41
CLCNKA-202ENST00000375692 CLCC1Q96S66 551 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms