RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 RHBDD3Q9Y3P4 386 aa11.79□□□□□ -0.52
NELFE-201ENST00000375425 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 AQP12BA6NM10 295 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 P2RY10O00398 339 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 LYNP07948 512 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 PRKACGP22612 351 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 ARF6P62330 175 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 CSNK2BP67870 215 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 IL13RA1P78552 427 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 MICBQ29980 383 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 Q6YL49 198 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 AQP12AQ8IXF9 295 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 HS3ST5Q8IZT8 346 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 CSNK2A3Q8NEV1 391 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 OTOSQ8NHW6 89 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 MGAM2Q2M2H8 2515 aa11.78□□□□□ -0.52
NELFE-201ENST00000375425 CDIPTO14735 213 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 SELENOFO60613 162 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 E2F6O75461 281 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 TIPRLO75663 272 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 HMGN1P05114 100 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 OSMP13725 252 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.52
NELFE-201ENST00000375425 GNALP38405 381 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 ELF3P78545 371 aaPredicted RBP11.77□□□□□ -0.52
NELFE-201ENST00000375425 CDK5Q00535 292 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 METTL11BQ5VVY1 283 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 WDR82Q6UXN9 313 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 CPOQ8IVL8 374 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 ZNF454Q8N9F8 522 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 ST8SIA4Q92187 359 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 TMIGD2Q96BF3 282 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 CCL13Q99616 98 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 PAPOLGQ9BWT3 736 aaKnown RBP11.77□□□□□ -0.52
NELFE-201ENST00000375425 RGCCQ9H4X1 137 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 ZNF556Q9HAH1 456 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 NOX4Q9NPH5 578 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 TNFRSF19Q9NS68 423 aa11.77□□□□□ -0.52
NELFE-201ENST00000375425 A0A1B0GW55 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 SRRM5B3KS81 715 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 HOXB6P17509 224 aaKnown RBP11.77□□□□□ -0.53
NELFE-201ENST00000375425 OMGP23515 440 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 NAA10P41227 235 aaPredicted RBP11.77□□□□□ -0.53
NELFE-201ENST00000375425 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 WDR38Q5JTN6 314 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 TMEM236Q5W0B7 351 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4L9Q6RFH8 374 aaPredicted RBP11.77□□□□□ -0.53
NELFE-201ENST00000375425 SPATA24Q86W54 205 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 FGFRL1Q8N441 504 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 FTMTQ8N4E7 242 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 LHX4Q969G2 390 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 ITPKCQ96DU7 683 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 SEH1LQ96EE3 360 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 MICU1Q9BPX6 476 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 DUX4Q9UBX2 424 aa11.77□□□□□ -0.53
NELFE-201ENST00000375425 FAM181BA6NEQ2 426 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ANXA2P2A6NMY6 339 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ZNF850A8MQ14 1090 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.76□□□□□ -0.53
NELFE-201ENST00000375425 PRODHO43272 600 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ANXA8P13928 327 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
NELFE-201ENST00000375425 ACKR3P25106 362 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 HCCSP53701 268 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
NELFE-201ENST00000375425 IL5RAQ01344 420 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 PRDX4Q13162 271 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 PDCD1Q15116 288 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 SNCBQ16143 134 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 SLC35D3Q5M8T2 416 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 PRR31Q5SQ13 230 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 BBS1Q8NFJ9 593 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 PIGCQ92535 297 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 FAM71F1Q96KD3 344 aaPredicted RBP11.76□□□□□ -0.53
NELFE-201ENST00000375425 LYZL4Q96KX0 146 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 TLNRD1Q9H1K6 362 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 ACOXLQ9NUZ1 547 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 RPUSD1Q9UJJ7 312 aaKnown RBP11.76□□□□□ -0.53
NELFE-201ENST00000375425 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
NELFE-201ENST00000375425 IGHV1-69DA0A0B4J2H0 117 aa11.75□□□□□ -0.53
NELFE-201ENST00000375425 GYG2O15488 501 aa11.75□□□□□ -0.53
NELFE-201ENST00000375425 CST4P01036 141 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms