RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 QRFPP83859 136 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 KRT74Q7RTS7 529 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 FOXRED1Q96CU9 486 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 HAVCR1Q96D42 359 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 UQCC2Q9BRT2 126 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 TBCCD1Q9NVR7 557 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 RHBDL2Q9NX52 303 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 JKAMPQ9P055 326 aa13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 ZNF629Q9UEG4 869 aaPredicted RBP13.54□□□□□ -0.24
NIPAL3-204ENST00000374399 GMDSO60547 372 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 PSMB1P20618 241 aaKnown RBP13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 PYDC2Q56P42 97 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 C22orf34Q6ZV56 151 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 CDH26Q8IXH8 852 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 IZUMO1Q8IYV9 350 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 GPR173Q9NS66 373 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 TBC1D24Q9ULP9 559 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 KALRNO60229 2985 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 SMPD2O60906 423 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 ARSBP15848 533 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 OR3A4PP47883 348 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 PITPNBP48739 271 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 PTH2RP49190 550 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 ART1P52961 327 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 RBPJQ06330 500 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 TBC1D28Q2M2D7 210 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 NPRL2Q8WTW4 380 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 S100PBPQ96BU1 408 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 OBP2BQ9NPH6 170 aa13.53□□□□□ -0.24
NIPAL3-204ENST00000374399 RELNP78509 3460 aa13.52□□□□□ -0.24
NIPAL3-204ENST00000374399 IGKV1-27A0A075B6S5 117 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 HLA-DQB1P01920 261 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 CECR9P0C854 216 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 ZNF35P13682 527 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 CCKARP32238 428 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 TALDO1P37837 337 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 UNC119Q13432 240 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 KISS1Q15726 138 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 SEZ6L2Q6UXD5 910 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 C1QL2Q7Z5L3 287 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 OR8H2Q8N162 312 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 Q8N402 240 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 OR56B2PQ8NGI1 322 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 CHPT1Q8WUD6 406 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 PIGTQ969N2 578 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 WBP1Q96G27 269 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 VKORC1Q9BQB6 163 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 OR51B6Q9H340 312 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 PIGMQ9H3S5 423 aa13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 MYEF2Q9P2K5 600 aaKnown RBP13.52□□□□□ -0.25
NIPAL3-204ENST00000374399 IGHV1-18A0A0C4DH31 117 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 A0A1W2PQ09 198 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 LANCL1O43813 399 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 LILRA1O75019 489 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 CTAG2O75638 210 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 KDM4BO94953 1096 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 HCKP08631 526 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 CDK2P24941 298 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 TMEM255AQ5JRV8 349 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 CLVS2Q5SYC1 327 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 ZBTB37Q5TC79 503 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 PYHIN1Q6K0P9 492 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 RAB40AQ8WXH6 277 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 TRIM63Q969Q1 353 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 AMDHD2Q9Y303 409 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 MEMO1Q9Y316 297 aa13.51□□□□□ -0.25
NIPAL3-204ENST00000374399 ZNF816-ZNF321PA0A0X1KG74 233 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 ISPDA4D126 451 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 WIPF3A6NGB9 483 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 ERVH48-1M5A8F1 160 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 VSIG8P0DPA2 414 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 NAT2P11245 290 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 SFTPCP11686 197 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 HOXC12P31275 282 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 CA7P43166 264 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 NR4A2P43354 598 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 ZP1P60852 638 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 ERVS71-1P61550 626 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 OXA1LQ15070 435 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 RGS21Q2M5E4 152 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 TIMM23BQ5SRD1 257 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 ANGPTL5Q86XS5 388 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 RFT1Q96AA3 541 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 SMG1Q96Q15 3661 aaKnown RBP13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 TMEM14DPA8MWL7 114 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 EEF1E1-BLOC1S5C9J1V9 151 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 J3QW42 95 aa13.5□□□□□ -0.25
NIPAL3-204ENST00000374399 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms