RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 C4orf36Q96KX1 117 aa13.5□□□□□ -0.25
HDHD3-202ENST00000374180 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
HDHD3-202ENST00000374180 ABCA1O95477 2261 aa13.5□□□□□ -0.25
HDHD3-202ENST00000374180 IFNL4K9M1U5 179 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 P2RY10O00398 339 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 CST4P01036 141 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 HSPA13P48723 471 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 CHN2P52757 468 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 RIPPLY1Q0D2K3 151 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 TMEM249Q2WGJ8 235 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 AVPI1Q5T686 147 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 IZUMO2Q6UXV1 221 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 MOGAT3Q86VF5 341 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 SEMA6DQ8NFY4 1073 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 FBLIM1Q8WUP2 373 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 PIGCQ92535 297 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
HDHD3-202ENST00000374180 C14orf119Q9NWQ9 140 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 WIPI2Q9Y4P8 454 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 DYSFO75923 2080 aa13.49□□□□□ -0.25
HDHD3-202ENST00000374180 LRP5LA4QPB2 252 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ANXA2P2A6NMY6 339 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF850A8MQ14 1090 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 DHRS3O75911 302 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LY6G6DO95868 133 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 HTR1AP08908 422 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 GATA4P43694 442 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 SYS1Q8N2H4 156 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PRSS35Q8N3Z0 413 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PLPP7Q8NBV4 271 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 OR2G2Q8NGZ5 317 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF420Q8TAQ5 688 aaPredicted RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ERGIC1Q969X5 290 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PELI1Q96FA3 418 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF649Q9BS31 505 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 JAM3Q9BX67 310 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 NARFLQ9H6Q4 476 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PPP1R3EQ9H7J1 279 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 UFSP2Q9NUQ7 469 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PIGLQ9Y2B2 252 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF816-ZNF321PA0A0X1KG74 233 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LOC100289279A0A1B0GTE1 492 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 A0A1B0GTI1 187 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 A0A1B0GVI7 797 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 TMEM178BH3BS89 294 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 GRPP07492 148 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LIMS3P0CW19 117 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LIMS4P0CW20 117 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 MYL12AP19105 171 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 RBMXP38159 391 aaKnown RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PRDX4Q13162 271 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 MPPED2Q15777 294 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PRAMEF6Q5VXH4 476 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 LAIR2Q6ISS4 152 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 FDX2Q6P4F2 183 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 DOK3Q7L591 496 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 GGHQ92820 318 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 RNF166Q96A37 237 aaPredicted RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 TMEM80Q96HE8 168 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 HIST1H2AAQ96QV6 131 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 MICU1Q9BPX6 476 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 FN3KRPQ9HA64 309 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 ABCB9Q9NP78 766 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 PLCXD1Q9NUJ7 323 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 CHCHD3Q9NX63 227 aaKnown RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 FRRS1LQ9P0K9 344 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 CR1P17927 2039 aa13.48□□□□□ -0.25
HDHD3-202ENST00000374180 NIPBLQ6KC79 2804 aaeCLIP13.48□□□□□ -0.25
HDHD3-202ENST00000374180 WNT9BO14905 357 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 SYT7O43581 403 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 XPNPEP2O43895 674 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 PTBP3O95758 552 aaKnown RBP13.47□□□□□ -0.25
HDHD3-202ENST00000374180 UBCP0CG48 685 aaKnown RBP13.47□□□□□ -0.25
HDHD3-202ENST00000374180 IRF2P14316 349 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 FAHP16930 419 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 PMELP40967 661 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 KIR3DL2P43630 455 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ETV1P50549 477 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 GBX2P52951 348 aaPredicted RBP13.47□□□□□ -0.25
HDHD3-202ENST00000374180 CSNK2BP67870 215 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ST3GAL4Q11206 333 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 MED21Q13503 144 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ZNF181Q2M3W8 571 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ZBTB37Q5TC79 503 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 TMPRSS11AQ6ZMR5 421 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 OR11L1Q8NGX0 322 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 OR14K1Q8NGZ2 314 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 CLDND2Q8NHS1 167 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 HPS1Q92902 700 aa13.47□□□□□ -0.25
HDHD3-202ENST00000374180 ITPKCQ96DU7 683 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms