RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 MASP2O00187 686 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HCRTR2O43614 444 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SOX15O60248 233 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 DUS4LO95620 317 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 IGHV2-5P01817 119 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CD5P06127 495 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 QDPRP09417 244 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ASAH2BP0C7U1 165 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HKR1P10072 659 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SPINK2P20155 84 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PPM1AP35813 382 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SULT1A1P50225 295 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RPS15AP62244 130 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 GAMTQ14353 236 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PDCD1Q15116 288 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SURF2Q15527 256 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HAGHQ16775 308 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CLEC12BQ2HXU8 276 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SLC35D3Q5M8T2 416 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 BTNL8Q6UX41 500 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SHISA6Q6ZSJ9 500 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 C1QL2Q7Z5L3 287 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ATG4DQ86TL0 474 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 COMMD2Q86X83 199 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ANGPTL5Q86XS5 388 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 DYRK2Q92630 601 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RSC1A1Q92681 617 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TM4SF19Q96DZ7 209 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM41AQ96HV5 264 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RTBDNQ9BSG5 229 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 APOOQ9BUR5 198 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 NXF5Q9H1B4 397 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PHPT1Q9NRX4 125 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CKLFQ9UBR5 152 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 DNAJB11Q9UBS4 358 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ZDHHC8Q9ULC8 765 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SLCO1B1Q9Y6L6 691 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PHF3Q92576 2039 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM269A0A1B0GVZ9 245 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 UMAD1C9J7I0 102 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 H0YL77 283 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 LDLRAD4O15165 306 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SOD3P08294 240 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 LINC00271P0C7V0 271 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SERPINA2P20848 420 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CDAP32320 146 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 GALNSP34059 522 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 EIF2S3P41091 472 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TM4SF4P48230 202 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CLDN17P56750 224 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM33P57088 247 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 KIAA0141Q14154 515 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HNF4GQ14541 408 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ALG11Q2TAA5 492 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 AWAT2Q6E213 333 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF574Q6ZN55 896 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 CPEB2Q7Z5Q1 589 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TAF8Q7Z7C8 310 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 OR13G1Q8NGZ3 307 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 METTL21AQ8WXB1 218 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ASB17Q8WXJ9 295 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 AQP3Q92482 292 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PHYHIPQ92561 330 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 MR1Q95460 341 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 MRPL24Q96A35 216 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RERGQ96A58 199 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 S100PBPQ96BU1 408 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 C8orf44Q96CB5 159 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ARHGAP5-AS1Q96IT6 56 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 THOC3Q96J01 351 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SMIM8Q96KF7 97 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 STACQ99469 402 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ZFYVE21Q9BQ24 234 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 SLC17A9Q9BYT1 436 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 OR8D2Q9GZM6 311 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RGCCQ9H4X1 137 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 PNO1Q9NRX1 252 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HRASLS2Q9NWW9 162 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF319Q9P2F9 582 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HIF3AQ9Y2N7 669 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 RHBDD3Q9Y3P4 386 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 HS3ST3B1Q9Y662 390 aa4.8□□□□□ -1.64
ATG4A-204ENST00000372246 TDRD6O60522 2096 aaKnown RBP4.8□□□□□ -1.64
ATG4A-204ENST00000372246 E9PLN8 166 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 NPIPB9F8W1W9 429 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 AP4M1O00189 453 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 XKRYO14609 159 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 AK1P00568 194 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 RENP00797 406 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CSTBP04080 98 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 CD1AP06126 327 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 HEXAP06865 529 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF708P17019 499 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 OMGP23515 440 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 S100PP25815 95 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 GRNP28799 593 aaKnown RBP4.79□□□□□ -1.64
ATG4A-204ENST00000372246 FCGR2CP31995 323 aa4.79□□□□□ -1.64
ATG4A-204ENST00000372246 HTR5AP47898 357 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms