RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 WNT5AP41221 380 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 SCN1BQ07699 218 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 PAQR4Q8N4S7 273 aaPredicted RBP22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 DTX3Q8N9I9 347 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 SSC4DQ8WTU2 575 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 CHPT1Q8WUD6 406 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 SH3BGRL2Q9UJC5 107 aa22.74■■□□□ 1.23
ATPAF1-202ENST00000371937 A0A0G2JNJ9 132 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 TMEM272A0A1B0GTI8 110 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 BPNT1O95861 308 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 BMP5P22003 454 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 TMEM42Q69YG0 159 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 PNLDC1Q8NA58 520 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 PTX4Q96A99 478 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 SPSB1Q96BD6 273 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 TECTBQ96PL2 329 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 GPER1Q99527 375 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 Q9UFV3 132 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 MRPS7Q9Y2R9 242 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 ZNF816-ZNF321PA0A0X1KG74 233 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 GMDSO60547 372 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 ICMTO60725 284 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 TPPPO94811 219 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 CELA3BP08861 270 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 PSMB1P20618 241 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 CASP6P55212 293 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 CNN3Q15417 329 aaKnown RBP22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 TRIQKQ629K1 86 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 ZNF101Q8IZC7 436 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 FAM169BQ8N8A8 192 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 ABHD1Q96SE0 405 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 SPTA1P02549 2419 aa22.73■■□□□ 1.23
ATPAF1-202ENST00000371937 A8MXE2 369 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 NRASP01111 189 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 PRKACBP22694 351 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 KISS1Q15726 138 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 MRGPRGQ86SM5 289 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 ANGPTL5Q86XS5 388 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 POC5Q8NA72 575 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 MINDY2Q8NBR6 621 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 SETD6Q8TBK2 473 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 C15orf40Q8WUR7 153 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 PHF21AQ96BD5 680 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 CPNE2Q96FN4 548 aaPredicted RBP22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 SPACA5Q96QH8 159 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 OCEL1Q9H607 264 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 PTTG3PQ9NZH4 202 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 KCNN3Q9UGI6 736 aa22.72■■□□□ 1.23
ATPAF1-202ENST00000371937 A0A1W2PQ09 198 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 TIMM23BQ5SRD1 257 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 TMEM69Q5SWH9 247 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 AWAT2Q6E213 333 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 TMEM211Q6ICI0 200 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 FTMTQ8N4E7 242 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 ST6GALNAC3Q8NDV1 305 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 VKORC1Q9BQB6 163 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 DIABLOQ9NR28 239 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 GPR173Q9NS66 373 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 EEF1E1-BLOC1S5C9J1V9 151 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 LDLRAD4O15165 306 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 EEF1E1O43324 174 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 AGFG2O95081 481 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 CDK2P24941 298 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 MMP15P51511 669 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 PRSS12P56730 875 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 TRIM16LQ309B1 348 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 C1QTNF12Q5T7M4 302 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 MYPOPQ86VE0 399 aaPredicted RBP22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 C19orf18Q8NEA5 215 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 CSNK2A3Q8NEV1 391 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 NPRL2Q8WTW4 380 aa22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 MRPS28Q9Y2Q9 187 aaKnown RBP22.71■■□□□ 1.23
ATPAF1-202ENST00000371937 GGT3PA6NGU5 568 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 CTDSPLO15194 276 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 CTAG2O75638 210 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 RAB6AP20340 208 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 EFNB2P52799 333 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 PLA2G7Q13093 441 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 CENPSQ8N2Z9 138 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 KCNK15Q9H427 330 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 FBLN5Q9UBX5 448 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 RAB22AQ9UL26 194 aa22.7■■□□□ 1.22
ATPAF1-202ENST00000371937 XRCC3O43542 346 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 HLA-DQB1P01920 261 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 UBBP0CG47 229 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 MNDAP41218 407 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 HLXQ14774 488 aaPredicted RBP22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 OXA1LQ15070 435 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 UNQ6126/PRO20091Q6UXV3 157 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 DCDC5Q6ZRR9 648 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 RFPL4BQ6ZWI9 263 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 OR56B2PQ8NGI1 322 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 C1QTNF6Q9BXI9 259 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 SLC25A15Q9Y619 301 aa22.69■■□□□ 1.22
ATPAF1-202ENST00000371937 ERVH48-1M5A8F1 160 aa22.68■■□□□ 1.22
ATPAF1-202ENST00000371937 IGLV1-44P01699 117 aa22.68■■□□□ 1.22
ATPAF1-202ENST00000371937 IZUMO1Q8IYV9 350 aa22.68■■□□□ 1.22
ATPAF1-202ENST00000371937 STEAP2Q8NFT2 490 aa22.68■■□□□ 1.22
ATPAF1-202ENST00000371937 UBASH3BQ8TF42 649 aa22.68■■□□□ 1.22
ATPAF1-202ENST00000371937 PIGCQ92535 297 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms