RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 ZNF729A6NN14 1252 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 PTHLHP12272 177 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 FOLR2P14207 255 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 NFYBP25208 207 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 CAPZA1P52907 286 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 SCAND1P57086 179 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 ACER2Q5QJU3 275 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 MUC20Q8N307 709 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 PLPP7Q8NBV4 271 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 OR51D1Q8NGF3 324 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 ZNF75AQ96N20 296 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 SEC61A2Q9H9S3 476 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 TAS2R4Q9NYW5 299 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 A0A0D9SG52 128 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 LMX1BO60663 402 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 CD2P06729 351 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 QDPRP09417 244 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 ZNF17P17021 662 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 FSTP19883 344 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 LUMP51884 338 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 EFNB2P52799 333 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 SMCO1Q147U7 214 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 MPPED2Q15777 294 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 EIF2S3LQ2VIR3 472 aaKnown RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 TMEM69Q5SWH9 247 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 JMJD6Q6NYC1 403 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 BIVMQ86UB2 503 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 NAA40Q86UY6 237 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 OR51A2Q8NGJ7 313 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 PSMF1Q92530 271 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
GPC3-201ENST00000370818 GDF2Q9UK05 429 aaPredicted RBP11.31□□□□□ -0.6
GPC3-201ENST00000370818 A0A0J9YW62 118 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 SLC17A2O00624 439 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 SERPINA7P05543 415 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 RNF224P0DH78 156 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
GPC3-201ENST00000370818 CLDN17P56750 224 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
GPC3-201ENST00000370818 RNF212Q495C1 297 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 SLC39A7Q92504 469 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 KCNK15Q9H427 330 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 P2RY10O00398 339 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 TTRP02766 147 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 CD37P11049 281 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 MNDAP41218 407 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 POU3F4P49335 361 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 TAS2R20P59543 309 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 RAC1P63000 192 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 OR13C3Q8NGS6 347 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
GPC3-201ENST00000370818 PIGQQ9BRB3 760 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 ASH2LQ9UBL3 628 aa11.3□□□□□ -0.6
GPC3-201ENST00000370818 LRRC3CA6NJW4 275 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 ACTL6AO96019 429 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 P04436 131 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 ZNF44P15621 663 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 ABOP16442 354 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 C2orf76Q3KRA6 126 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 KCNRGQ8N5I3 272 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 TCEAL7Q9BRU2 100 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 PNRC2Q9NPJ4 139 aaKnown RBP11.29□□□□□ -0.6
GPC3-201ENST00000370818 CKLFQ9UBR5 152 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 AHCTF1Q8WYP5 2266 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 TNFSF11O14788 317 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 RER1O15258 196 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 CTAG2O75638 210 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 GLSO94925 669 aaPredicted RBP11.29□□□□□ -0.6
GPC3-201ENST00000370818 RAB11BQ15907 218 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 KCNMB1Q16558 191 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 TMEM244Q5VVB8 128 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 ANKRD16Q6P6B7 361 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 YRDCQ86U90 279 aaKnown RBP11.29□□□□□ -0.6
GPC3-201ENST00000370818 BEST3Q8N1M1 668 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 PHYHIPLQ96FC7 376 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 EGLN1Q9GZT9 426 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 PBOV1Q9GZY1 135 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 DEPPQ9NTK1 212 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 ASF1BQ9NVP2 202 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 POLR1DQ9Y2S0 133 aa11.29□□□□□ -0.6
GPC3-201ENST00000370818 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
GPC3-201ENST00000370818 XRCC3O43542 346 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 MT-CO3P00414 261 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 SRD5A2P31213 254 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 PEA15Q15121 130 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 TOMM20Q15388 145 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 OR2B11Q5JQS5 317 aa11.28□□□□□ -0.6
GPC3-201ENST00000370818 DNM1P46Q6ZS02 220 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms