RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 TEX29Q8N6K0 151 aa17.14■□□□□ 0.33
SMNDC1-201ENST00000369592 NEIL1Q96FI4 390 aaPredicted RBP17.14■□□□□ 0.33
SMNDC1-201ENST00000369592 MROQ9BYG7 248 aa17.14■□□□□ 0.33
SMNDC1-201ENST00000369592 C14orf119Q9NWQ9 140 aa17.14■□□□□ 0.33
SMNDC1-201ENST00000369592 CLN6Q9NWW5 311 aa17.14■□□□□ 0.33
SMNDC1-201ENST00000369592 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 TMEM269A0A1B0GVZ9 245 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 LGALS8O00214 317 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 IRF2P14316 349 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 SRSF2Q01130 221 aaKnown RBP17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 PAX8Q06710 450 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 ZNF154Q13106 437 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 SNCBQ16143 134 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 ESCO2Q56NI9 601 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 ZNF684Q5T5D7 378 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 SLC35F2Q8IXU6 374 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 GALNT4Q8N4A0 578 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 C19orf18Q8NEA5 215 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 OR8J1Q8NGP2 316 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 C7orf69Q9H7B7 122 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 RNPEPL1Q9HAU8 725 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 C1orf123Q9NWV4 160 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 WARS2Q9UGM6 360 aaKnown RBP17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 NUFIP1Q9UHK0 495 aaKnown RBP17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 MPC1Q9Y5U8 109 aa17.13■□□□□ 0.33
SMNDC1-201ENST00000369592 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 RPS2P15880 293 aaKnown RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 HTR1FP30939 366 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 CXCR4P61073 352 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 MFGE8Q08431 387 aaPredicted RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 GFOD2Q3B7J2 385 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 SLC25A30Q5SVS4 291 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 TEX36Q5VZQ5 186 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 ZNF322Q6U7Q0 402 aaPredicted RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 Q6ZSR3 168 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 OR1M1Q8NGA1 313 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 HPSE2Q8WWQ2 592 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 OR5P3Q8WZ94 311 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 PPP1R14AQ96A00 147 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 EME1Q96AY2 570 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 HRASLS5Q96KN8 279 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 SSBP3Q9BWW4 388 aaPredicted RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 PBOV1Q9GZY1 135 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 RIBC2Q9H4K1 309 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 CTSZQ9UBR2 303 aa17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 MRM2Q9UI43 246 aaKnown RBP17.12■□□□□ 0.33
SMNDC1-201ENST00000369592 A0A0A6YYJ9 748 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 EI24O14681 340 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 PHYHO14832 338 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 FCN3O75636 299 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 GRPP07492 148 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 EGR1P18146 543 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 ADRA2CP18825 462 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 CD80P33681 288 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 ALDH3A2P51648 485 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 RIDAP52758 137 aaKnown RBP17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 EGR3Q06889 387 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 TMED1Q13445 227 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 WDR25Q64LD2 544 aaPredicted RBP17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 WDR82Q6UXN9 313 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 SSX6Q7RTT6 188 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 SEMA6DQ8NFY4 1073 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 OR8S1Q8NH09 359 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 UBE2FQ969M7 185 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 APOL4Q9BPW4 351 aa17.11■□□□□ 0.33
SMNDC1-201ENST00000369592 OOEPA6NGQ2 149 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 MAGEB4O15481 346 aaPredicted RBP17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 TCF21O43680 179 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 TTRP02766 147 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 PPIAL4GP0DN37 164 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 ATP6V1B1P15313 513 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 EPHA1P21709 976 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 PITPNBP48739 271 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 CSNK2BP67870 215 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 IL5RAQ01344 420 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 PRDX4Q13162 271 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 KLF17Q5JT82 389 aaPredicted RBP17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 USP43Q70EL4 1123 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 FAM90A1Q86YD7 464 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 OR8B3Q8NGG8 313 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 NANPQ8TBE9 248 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 TRUB1Q8WWH5 349 aaKnown RBP17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 OR8B2Q96RD0 313 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 PAPOLGQ9BWT3 736 aaKnown RBP17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 TTTY10Q9BZA0 68 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 S100A14Q9HCY8 104 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 ABCB9Q9NP78 766 aa17.1■□□□□ 0.33
SMNDC1-201ENST00000369592 IGHV2-70DA0A0C4DH43 119 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 KIR2DS1A0A191URI9 304 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 ZNF850A8MQ14 1090 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 OR2T7P0C7T2 308 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 ZNF829Q3KNS6 432 aaPredicted RBP17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 SFRP4Q6FHJ7 346 aaPredicted RBP17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 C10orf67Q8IYJ2 551 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 FTMTQ8N4E7 242 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 CBR4Q8N4T8 237 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 OR51G2Q8NGK0 314 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 OR2T27Q8NH04 317 aa17.09■□□□□ 0.33
SMNDC1-201ENST00000369592 RAB40AQ8WXH6 277 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms