RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 PLPP7Q8NBV4 271 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 OR51A4Q8NGJ6 313 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 OR13C3Q8NGS6 347 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 OR8S1Q8NH09 359 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 TSEN15Q8WW01 171 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 NEU4Q8WWR8 484 aaPredicted RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 MBD6Q96DN6 1003 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 GSX2Q9BZM3 304 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 MRPL15Q9P015 296 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 HHLA2Q9UM44 414 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 LSM2Q9Y333 95 aaKnown RBP11.81□□□□□ -0.52
TPM3-211ENST00000368531 LRBAP50851 2863 aa11.81□□□□□ -0.52
TPM3-211ENST00000368531 DYSFO75923 2080 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 ZNF816-ZNF321PA0A0X1KG74 233 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 LOC390937A0A1W2PQ73 354 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 F12P00748 615 aaPredicted RBP11.8□□□□□ -0.52
TPM3-211ENST00000368531 ISG15P05161 165 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 DAOP14920 347 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 ATP6V1B1P15313 513 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 CCL1P22362 96 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 SOX2P48431 317 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 TAS2R43P59537 309 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 EMX1Q04741 257 aaPredicted RBP11.8□□□□□ -0.52
TPM3-211ENST00000368531 PCGF3Q3KNV8 242 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 KCTD21Q4G0X4 260 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 CEP78Q5JTW2 689 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 DMKNQ6E0U4 476 aaPredicted RBP11.8□□□□□ -0.52
TPM3-211ENST00000368531 FTMTQ8N4E7 242 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 SVOPQ8N4V2 548 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 OR13C5Q8NGS8 318 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 GHSRQ92847 366 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 FGGYQ96C11 551 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 SMIM19Q96E16 107 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 OR2V2Q96R30 315 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 DIRC2Q96SL1 478 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 EGLN1Q9GZT9 426 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 ACOT13Q9NPJ3 140 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 GPR173Q9NS66 373 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 ENPP5Q9UJA9 477 aa11.8□□□□□ -0.52
TPM3-211ENST00000368531 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 ANXA2P2A6NMY6 339 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 GMDSO60547 372 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 MRPS14O60783 128 aaKnown RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 CST4P01036 141 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 NRASP01111 189 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 GRPP07492 148 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 PAX1P15863 534 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZNF12P17014 697 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZNF20P17024 532 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 COL8A2P25067 703 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 TBCEQ15813 527 aaPredicted RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 FAM209AQ5JX71 171 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 PLCXD3Q63HM9 321 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZNF773Q6PK81 442 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 KCTD8Q6ZWB6 473 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZDHHC23Q8IYP9 409 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZNF525Q8N782 197 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 RPS4Y2Q8TD47 263 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 ADAT3Q96EY9 351 aaPredicted RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 MEGF10Q96KG7 1140 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 MGLLQ99685 303 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 SLC22A4Q9H015 551 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 BARX1Q9HBU1 254 aaPredicted RBP11.79□□□□□ -0.52
TPM3-211ENST00000368531 UFSP2Q9NUQ7 469 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 NKIRAS2Q9NYR9 191 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 DHDHQ9UQ10 334 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 ZNF281Q9Y2X9 895 aa11.79□□□□□ -0.52
TPM3-211ENST00000368531 PLPP2O43688 288 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 CD55P08174 381 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 ADH4P08319 380 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 RPSAP08865 295 aaKnown RBP11.78□□□□□ -0.52
TPM3-211ENST00000368531 SRP9P49458 86 aaKnown RBP11.78□□□□□ -0.52
TPM3-211ENST00000368531 ACSM1Q08AH1 577 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 Q5PR19 223 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 CLVS2Q5SYC1 327 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 PRAMEF6Q5VXH4 476 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 LIPKQ5VXJ0 399 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 Q6ZSR3 168 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 ZNF367Q7RTV3 350 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 TGIF2LYQ8IUE0 185 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 LRRC75A-AS1Q8N1F1 130 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 CCDC54Q8NEL0 328 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 NPRL2Q8WTW4 380 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 UFD1Q92890 307 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 YIPF5Q969M3 257 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 RNF170Q96K19 258 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 HIST1H2AAQ96QV6 131 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 TMED9Q9BVK6 235 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
TPM3-211ENST00000368531 ZNF275Q9NSD4 429 aaPredicted RBP11.78□□□□□ -0.52
TPM3-211ENST00000368531 IL19Q9UHD0 177 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms