RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 VN1R4Q7Z5H5 301 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 TSPAN32Q96QS1 320 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 KNL1Q8NG31 2342 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 IGHV3-43A0A0B4J1X8 118 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 IGHV3-43DP0DP04 118 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 UBE2G2P60604 165 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 SMIM21Q3B7S5 101 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 FAM109AQ8N4B1 249 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 RFESDQ8TAC1 157 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 MN1Q10571 1320 aaPredicted RBP11.56□□□□□ -0.56
PTPRK-207ENST00000368226 SERTM2A0A1B0GWG4 89 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 C3orf80F5H4A9 247 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 ZNF205O95201 554 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 ASCL1P50553 236 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 SYS1Q8N2H4 156 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 OR10AD1Q8NGE0 317 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 CMBLQ96DG6 245 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 SPINT1O43278 529 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 CTXN2P0C2S0 81 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 TBPP20226 339 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 TRA2AQ13595 282 aaKnown RBP eCLIP11.56□□□□□ -0.565e-6■■■■□ 22.5
PTPRK-207ENST00000368226 BAGE3Q86Y29 109 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 BAGE2Q86Y30 109 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
PTPRK-207ENST00000368226 F6UZH7 168 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 HRKO00198 91 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 SUMO3P55854 103 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 OTOSQ8NHW6 89 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 MCHR2Q969V1 340 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 APOBEC3DQ96AK3 386 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 BARX1Q9HBU1 254 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 PPIL1Q9Y3C6 166 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 ZNF724A8MTY0 619 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 CD160O95971 181 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 NDUFB3O43676 98 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 TAGLNQ01995 201 aaKnown RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 SPINK9Q5DT21 86 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 DBX2Q6ZNG2 339 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 SIAEQ9HAT2 523 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 SERTM1A2A2V5 107 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 K7EQM0 130 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 OR7C2O60412 319 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 DFFBO76075 338 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 NKX2-2O95096 273 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 ZNF32P17041 273 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 ETV6P41212 452 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 PMP22Q01453 160 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 CLEC12BQ2HXU8 276 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 PABPC1L2AQ5JQF8 200 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 STUMQ69YW2 141 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 DND1Q8IYX4 353 aaKnown RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 GALMQ96C23 342 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 NTN4Q9HB63 628 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 TNFSF14O43557 240 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 TXNDC12O95881 172 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 PAX6P26367 422 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 MAGEA5P43359 124 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 DBPQ10586 325 aaPredicted RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 SLC51BQ86UW2 128 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 GPR32P1Q8NGA4 272 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 LRFN5Q96NI6 719 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
PTPRK-207ENST00000368226 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
PTPRK-207ENST00000368226 COX7A1P24310 79 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 FUT6P51993 359 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 WDR38Q5JTN6 314 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 OR2A2Q6IF42 318 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 SMCHD1A6NHR9 2005 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 TRGV10A0A0A0MS01 117 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 AGFG2O95081 481 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 SLC25A6P12236 298 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 SP6Q3SY56 376 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 LRRC10Q5BKY1 277 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 OR4F5Q8NH21 305 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 LILRB4Q8NHJ6 448 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 OR4F4Q96R69 305 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 OR4E1P0C645 316 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 EIF3IQ13347 325 aaKnown RBP11.54□□□□□ -0.56
PTPRK-207ENST00000368226 FAM122CQ6P4D5 195 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 EXTL1Q92935 676 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 ERGIC1Q969X5 290 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 TMEM230Q96A57 120 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 RREB1Q92766 1687 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 OR6C68A6NDL8 312 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 PCBP4P57723 403 aaKnown RBP11.54□□□□□ -0.56
PTPRK-207ENST00000368226 ETFDHQ16134 617 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 PCED1AQ9H1Q7 454 aa11.54□□□□□ -0.56
PTPRK-207ENST00000368226 SCN1AP35498 2009 aa11.53□□□□□ -0.56
PTPRK-207ENST00000368226 KRBOX1C9JBD0 128 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms