RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CEP290O15078 2479 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 IGHV5-10-1A0A0J9YXX1 117 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 RAD51DO75771 328 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 APOC1P02654 83 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 APOC3P02656 99 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 SLC2A1P11166 492 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 NAT2P11245 290 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 AMY2BP19961 511 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 SURF2Q15527 256 aaPredicted RBP12.59□□□□□ -0.39
CD48-201ENST00000368045 SMAD2Q15796 467 aaKnown RBP12.59□□□□□ -0.39
CD48-201ENST00000368045 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
CD48-201ENST00000368045 CCDC157Q569K6 752 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 ELP2Q6IA86 826 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 GUSBP11Q6P575 273 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 WDSUB1Q8N9V3 476 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 RHBDD1Q8TEB9 315 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 TMEM230Q96A57 120 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 ARHGAP5-AS1Q96IT6 56 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 BANF2Q9H503 90 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 C5orf66Q9H5L9 145 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 WDR54Q9H977 334 aa12.59□□□□□ -0.39
CD48-201ENST00000368045 CHCHD2Q9Y6H1 151 aaPredicted RBP12.59□□□□□ -0.39
CD48-201ENST00000368045 IGKV1-9A0A0C4DH69 117 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 C13orf42A0A1B0GVH6 325 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 A0A1W2PQM1 296 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 FOXI3A8MTJ6 420 aaPredicted RBP12.58□□□□□ -0.39
CD48-201ENST00000368045 SERPINE3A8MV23 424 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.39
CD48-201ENST00000368045 VAMP5O95183 116 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 OPN1LWP04000 364 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 SFTPDP35247 375 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 ECI1P42126 302 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 PTGFRP43088 359 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 OR3A2P47893 321 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 CSNK1A1P48729 337 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 CCL7P80098 99 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 BEX5Q5H9J7 111 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 MRPL14Q6P1L8 145 aaKnown RBP12.58□□□□□ -0.39
CD48-201ENST00000368045 SLC16A14Q7RTX9 510 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 RNF144BQ7Z419 303 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 ARMC10Q8N2F6 343 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 BPIFCQ8NFQ6 507 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 OR52H1Q8NGJ2 320 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 OR51T1Q8NGJ9 327 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 TMEM54Q969K7 222 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 SOX7Q9BT81 388 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 RNF126Q9BV68 326 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 TM2D1Q9BX74 207 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 TMEM100Q9NV29 134 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 V9GYS6 101 aa12.58□□□□□ -0.39
CD48-201ENST00000368045 LOC102723996A0A087X1L8 192 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 TOR1AO14656 332 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 PET100P0DJ07 73 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 NPY4RP50391 375 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 CLDN17P56750 224 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 HIST1H3AP68431 136 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 H3F3AP84243 136 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 MC2RQ01718 297 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 ARFRP1Q13795 201 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 KISS1Q15726 138 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 SGCAQ16586 387 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 HIST2H3PS2Q5TEC6 136 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 PRSS54Q6PEW0 395 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 OPN5Q6U736 354 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 CLEC18BQ6UXF7 455 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 HIST2H3AQ71DI3 136 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 RTN4RL2Q86UN3 420 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 CLDN23Q96B33 292 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 INTS12Q96CB8 462 aaKnown RBP12.58□□□□□ -0.4
CD48-201ENST00000368045 CCDC74BQ96LY2 380 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.4
CD48-201ENST00000368045 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 ZNF160Q9HCG1 818 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 DNAJB11Q9UBS4 358 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 PCDHB10Q9UN67 800 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 OSGIN2Q9Y236 505 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 DNAH14Q0VDD8 3507 aa12.58□□□□□ -0.4
CD48-201ENST00000368045 ASXL3Q9C0F0 2248 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 LY6G6EA0A0G2JKS1 128 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 K7ESF4 209 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 RAMP1O60894 148 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 DHRS3O75911 302 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 PGAM2P15259 253 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 CXCL12P48061 93 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 SLC6A9P48067 706 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 PCOLCEQ15113 449 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 STK11Q15831 433 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 OR5T2Q8NGG2 359 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 OR13G1Q8NGZ3 307 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 EMG1Q92979 244 aaKnown RBP12.57□□□□□ -0.4
CD48-201ENST00000368045 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
CD48-201ENST00000368045 U3KQA8 63 aa12.57□□□□□ -0.4
CD48-201ENST00000368045 UNC13CQ8NB66 2214 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms