RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LINC00346Q8IVM7 164 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 FAM156AQ8NDB6 213 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 FOXRED1Q96CU9 486 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-202ENST00000367740 C16orf45Q96MC5 204 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-202ENST00000367740 P2RX4Q99571 388 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
VAMP4-202ENST00000367740 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 SH3GLB1Q9Y371 365 aa11.67□□□□□ -0.54
VAMP4-202ENST00000367740 ACAA1P09110 424 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-202ENST00000367740 NAA10P41227 235 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-202ENST00000367740 DYNLT3P51808 116 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 SSX2Q16385 188 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 ANKDD1AQ495B1 522 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 SLC18B1Q6NT16 456 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 PGM2L1Q6PCE3 622 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 BLOC1S3Q6QNY0 202 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 C8orf86Q6ZUL3 223 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
VAMP4-202ENST00000367740 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 SPDL1Q96EA4 605 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 PITX2Q99697 317 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 TLNRD1Q9H1K6 362 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 HECTD4Q9Y4D8 3996 aa11.66□□□□□ -0.54
VAMP4-202ENST00000367740 HTR3EA5X5Y0 456 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 M0R135 149 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 DCTN6O00399 190 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 CDIPTO14735 213 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 RHBDL1O75783 438 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 JTBO76095 146 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 MDH1P40925 334 aaKnown RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 ECI1P42126 302 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 CEBPDP49716 269 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 RPL23AP62750 156 aaKnown RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 SELPLGQ14242 412 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 RFX4Q33E94 735 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 DLEU7Q6UYE1 221 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 PTCHD4Q6ZW05 846 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 NRMQ8IXM6 262 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 ZNRF1Q8ND25 227 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 MALSU1Q96EH3 234 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 ZNF799Q96GE5 643 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 TSSK2Q96PF2 358 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 NMNAT1Q9HAN9 279 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 EDA2RQ9HAV5 297 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 TBL2Q9Y4P3 447 aaKnown RBP11.65□□□□□ -0.54
VAMP4-202ENST00000367740 SMAD5-AS1Q9Y6J3 95 aa11.65□□□□□ -0.54
VAMP4-202ENST00000367740 EFCAB9A8MZ26 197 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 CDC42EP2O14613 210 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 TIPRLO75663 272 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 LPLP06858 475 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 AZGP1P25311 298 aaKnown RBP11.64□□□□□ -0.55
VAMP4-202ENST00000367740 MYCNOSP40205 109 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 MRPL19P49406 292 aaKnown RBP11.64□□□□□ -0.55
VAMP4-202ENST00000367740 SLC25A1P53007 311 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 TPTEP56180 551 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 MTPNP58546 118 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 SPIBQ01892 262 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF782Q6ZMW2 699 aaPredicted RBP11.64□□□□□ -0.55
VAMP4-202ENST00000367740 EIF1ADQ8N9N8 165 aaKnown RBP11.64□□□□□ -0.55
VAMP4-202ENST00000367740 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 RASSF5Q8WWW0 418 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 PPP1R3EQ9H7J1 279 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 LRP12Q9Y561 859 aa11.64□□□□□ -0.55
VAMP4-202ENST00000367740 IGLV1-36A0A0B4J1U3 117 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
VAMP4-202ENST00000367740 ARG1P05089 322 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 CCL3L1P16619 93 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 OR1E2P47887 323 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 CENPAP49450 140 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 PRKCDQ05655 676 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 MPP2Q14168 576 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 OR2W3Q7Z3T1 314 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 SLC26A10Q8NG04 563 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 ISOC1Q96CN7 298 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 DUX3Q96PT4 197 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 CCDC167Q9P0B6 97 aa11.63□□□□□ -0.55
VAMP4-202ENST00000367740 IGKV1D-17A0A075B6S4 117 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 OR2AT4A6NND4 320 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ANKRD30BLA7E2S9 258 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 FAM90A22PA8MWA6 464 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 SOCS2O14508 198 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 AKR7A2O43488 359 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 GABRA2P47869 451 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 IFFO1Q0D2I5 559 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 NFYCQ13952 458 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ABCA11PQ4W5N1 156 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ZNF626Q68DY1 528 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 PIGWQ7Z7B1 504 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ADCK1Q86TW2 530 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 OSR2Q8N2R0 312 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 OR10Z1Q8NGY1 313 aa11.62□□□□□ -0.55
VAMP4-202ENST00000367740 ZMAT4Q9H898 229 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms