RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 GABRG2P18507 467 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM268Q5VZI3 342 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF429Q86V71 674 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM123Q8N131 208 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 STT3BQ8TCJ2 826 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PHYHIPLQ96FC7 376 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 KIAA0100Q14667 2235 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 E9PQ18 207 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ALOX12BO75342 701 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SYNGR4O95473 234 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 COL9A1P20849 921 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF93P35789 620 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 CXCL12P48061 93 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 GSK3AP49840 483 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 MELKQ14680 651 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 EXT1Q16394 746 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PRTGQ2VWP7 1150 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 GLYATL3Q5SZD4 288 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 RAET1LQ5VY80 246 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PRR27Q6MZM9 219 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ATG4DQ86TL0 474 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZDHHC22Q8N966 263 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 NPEPL1Q8NDH3 523 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PATE1Q8WXA2 126 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 MS4A10Q96PG2 267 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 GPX7Q96SL4 187 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 METTL9Q9H1A3 318 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 WBP1LQ9NX94 342 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 VDAC3Q9Y277 283 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SIAH2O43255 324 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 KLF4O43474 513 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 RRASP10301 218 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PSMB6P28072 239 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 HNF4GQ14541 408 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF626Q68DY1 528 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ABHD12BQ7Z5M8 362 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TRMT61AQ96FX7 289 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 KIRREL1Q96J84 757 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 C4orf45Q96LM5 186 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 RAB33BQ9H082 229 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 DHCR7Q9UBM7 475 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC5A6Q9Y289 635 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 MRPS28Q9Y2Q9 187 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 A0A1B0GV90 55 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ALG1L2C9J202 215 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 BCAT2O15382 392 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SLC31A2O15432 143 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 NXPH3O95157 252 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SRFP11831 508 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 SFTPDP35247 375 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF133P52736 654 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 GABREP78334 506 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 RPL24P83731 157 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PNLIPRP3Q17RR3 467 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 UNQ9370/PRO34162Q6UXP9 181 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 CDC20BQ86Y33 519 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 STPG2Q8N412 459 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 PRR18Q8N4B5 295 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TAAR9Q96RI9 348 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM59Q9BXS4 323 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 NXF5Q9H1B4 397 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 FLRT3Q9NZU0 649 aa4.83□□□□□ -1.64
CDC42BPA-204ENST00000366767 TRAPPC6AO75865 159 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ACKR3P25106 362 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 UBE2MP61081 183 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 MRPL49Q13405 166 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 MSMO1Q15800 293 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF66Q6ZN08 573 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF600Q6ZNG1 722 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 CPEB2Q7Z5Q1 589 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR13C8Q8NGS7 320 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 C22orf15Q8WYQ4 148 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 GPR87Q9BY21 358 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 B4GALT7Q9UBV7 327 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 APC2O95996 2303 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM229AB2RXF0 380 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 HRO43593 1189 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 SCRG1O75711 98 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF728P0DKX0 622 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF250P15622 560 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ALOX5APP20292 161 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR10J1P30954 320 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 DVL1P1P54792 670 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 EFNB1P98172 346 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 MALLQ13021 153 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 TMEM65Q6PI78 240 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 ZNF485Q8NCK3 441 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR4F5Q8NH21 305 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 FGGYQ96C11 551 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR4F4Q96R69 305 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 LOC105371267A0A1B0GV96 52 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 A0A1W2PPQ1 181 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 FTCDNL1E5RQL4 147 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 OR4E1P0C645 316 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 PMCHP20382 165 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 MPGP29372 298 aa4.82□□□□□ -1.64
CDC42BPA-204ENST00000366767 PMPCAQ10713 525 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms