RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 NKG7Q16617 165 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 ADPRHL1Q8NDY3 354 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 OR52L2PQ8NGH6 319 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 MS4A7Q9GZW8 240 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 DUSP15Q9H1R2 295 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 FAM221AA4D161 298 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SERPINE3A8MV23 424 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 LIPAP38571 399 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 PAFAH1B2P68402 229 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 POU4F3Q15319 338 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 WDR74Q6RFH5 385 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 CXorf67Q86X51 503 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 OR51S1Q8NGJ8 323 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 RPL3LQ92901 407 aaKnown RBP9.84□□□□□ -0.83
CLIP1-203ENST00000361654 LRFN3Q9BTN0 628 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 POFUT1Q9H488 388 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 TMEM231Q9H6L2 316 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 FBXO34Q9NWN3 711 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 A0A1W2PPC1 479 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 C16orf97H3BN30 126 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 GNG10P50151 68 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 OXA1LQ15070 435 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SPICQ8N5J4 248 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 ERGIC1Q969X5 290 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 ISL2Q96A47 359 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
CLIP1-203ENST00000361654 ATXN7O15265 892 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 XRCC3O43542 346 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 SEMA7AO75326 666 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 SLC25A6P12236 298 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 RPL34P49207 117 aaKnown RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF793Q6ZN11 406 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 OR5H6Q8NGV6 325 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 EXTL1Q92935 676 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 IL36GQ9NZH8 169 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 N4BP2Q86UW6 1770 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 PRKNO60260 465 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 JTBO76095 146 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 SSTR2P30874 369 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 FZD5Q13467 585 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 PNLIPRP3Q17RR3 467 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 CHST6Q9GZX3 395 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 GAR1Q9NY12 217 aaKnown RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 A0A1W2PR80 420 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 B3GALNT1O75752 331 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 FGF2P09038 288 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 FPR2P25090 351 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 PWWP2BQ6NUJ5 590 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 KIRREL2Q6UWL6 708 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 SLC7A6Q92536 515 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 LHX4Q969G2 390 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ADTRPQ96IZ2 230 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 WDR61Q9GZS3 305 aaKnown RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 PLEKHA2Q9HB19 425 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 TAF9BQ9HBM6 251 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 BOLA1Q9Y3E2 137 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 FAHP16930 419 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 TAGLN2P37802 199 aaKnown RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ENDOGQ14249 297 aaKnown RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 KCNMB1Q16558 191 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF260Q3ZCT1 412 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 NANOGP1Q8N7R0 232 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 VSTM2AQ8TAG5 236 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 GPR119Q8TDV5 335 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF707Q96C28 371 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-203ENST00000361654 OR51I2Q9H344 312 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 SAP30LQ9HAJ7 183 aa9.83□□□□□ -0.84
CLIP1-203ENST00000361654 ARPC4-TTLL3A0A0A6YYG9 625 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 F5H697 171 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CYR61O00622 381 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 FZD6O60353 706 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 SLC2A10O95528 541 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CA6P23280 308 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 FCER1GP30273 86 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF90Q03938 601 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 ZNF816Q0VGE8 651 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 LAX1Q8IWV1 398 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR2M7Q8NG81 312 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 MISP3Q96FF7 219 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 SPACA5Q96QH8 159 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 AK3Q9UIJ7 227 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 NRXN3Q9Y4C0 1643 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 A0A0A6YYD5 115 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CLEC18AA5D8T8 446 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 SSSCA1O60232 199 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 TMEM127O75204 238 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OTUD1Q5VV17 481 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 DGAT2L7PQ6IED9 249 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 HIST2H3AQ71DI3 136 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 BCDIN3DQ7Z5W3 292 aaKnown RBP9.82□□□□□ -0.84
CLIP1-203ENST00000361654 SLC38A6Q8IZM9 456 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 CLEC18CQ8NCF0 446 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 OR13D1Q8NGV5 346 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 RAB18Q9NP72 206 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 RGPD2P0DJD1 1756 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 TCRBV5S1A1TA0A578 114 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 E5RGE8 158 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 H7BYZ3 331 aa9.82□□□□□ -0.84
CLIP1-203ENST00000361654 GPR31O00270 319 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms