RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 THNSL2Q86YJ6 484 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 HBE1P02100 147 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 C1QAP02745 245 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 NPBWR1P48145 328 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 ZNF85Q03923 595 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 AGAP14A8MT82 685 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 PPIHO43447 177 aaKnown RBP16.61■□□□□ 0.25
CLIP2-202ENST00000361545 GNG3P63215 75 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 PARP12Q9H0J9 701 aaKnown RBP16.61■□□□□ 0.25
CLIP2-202ENST00000361545 TMEFF2Q9UIK5 374 aaPredicted RBP16.61■□□□□ 0.25
CLIP2-202ENST00000361545 PCOLCE2Q9UKZ9 415 aa16.61■□□□□ 0.25
CLIP2-202ENST00000361545 EPPINO95925 133 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 SLC25A1P53007 311 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 UBE2KP61086 200 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 PSG6Q00889 435 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 MICBQ29980 383 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 RNF165Q6ZSG1 346 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 SAT2Q96F10 170 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-202ENST00000361545 AUNIPQ9H7T9 357 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 ONECUT1Q9UBC0 465 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 CRYM-AS1A6NIL9 109 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 PLPP3O14495 311 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 HPNP05981 417 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 DDOSTP39656 456 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 CDKN2AP42771 156 aaKnown RBP16.6■□□□□ 0.25
CLIP2-202ENST00000361545 SSTP61278 116 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 FUT7Q11130 342 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 WDR38Q5JTN6 314 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 ADPRHL1Q8NDY3 354 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 C19orf12Q9NSK7 152 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 PDGFBP01127 241 aaPredicted RBP16.6■□□□□ 0.25
CLIP2-202ENST00000361545 PRSS12P56730 875 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 MARCH1Q8TCQ1 289 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 GALMQ96C23 342 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 KCNIP2Q9NS61 270 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 DFFBO76075 338 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 RAB4AP20338 218 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 C1QL3Q5VWW1 255 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 MPZL1O95297 269 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 EPXP11678 715 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 SCGB2A2Q13296 93 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 SSX2Q16385 188 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 ISXQ2M1V0 245 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 OR13C8Q8NGS7 320 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 DOK1Q99704 481 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 ESRP2Q9H6T0 727 aaKnown RBP16.6■□□□□ 0.25
CLIP2-202ENST00000361545 DLL4Q9NR61 685 aa16.6■□□□□ 0.25
CLIP2-202ENST00000361545 CCL3P10147 92 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 CDK5Q00535 292 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 BTN1A1Q13410 526 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 THSD4Q6ZMP0 1018 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 VSTM2LQ96N03 204 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 FYTTD1Q96QD9 318 aaKnown RBP16.59■□□□□ 0.25
CLIP2-202ENST00000361545 LY75O60449 1722 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
CLIP2-202ENST00000361545 ASXL3Q9C0F0 2248 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 CLN5O75503 358 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 ARL16Q0P5N6 197 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 GAB4Q2WGN9 574 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 SMIM15Q7Z3B0 74 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 SLC7A6Q92536 515 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 LIN7CQ9NUP9 197 aaKnown RBP16.59■□□□□ 0.25
CLIP2-202ENST00000361545 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 MRGPREQ86SM8 312 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 EXTL1Q92935 676 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 GDF15Q99988 308 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 FLVCR2Q9UPI3 526 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 BOLA1Q9Y3E2 137 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 CYR61O00622 381 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 GPR37O15354 613 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 ADH4P08319 380 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 MGST1P10620 155 aaKnown RBP16.59■□□□□ 0.25
CLIP2-202ENST00000361545 S100A11P31949 105 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 HABP2Q14520 560 aaPredicted RBP16.59■□□□□ 0.25
CLIP2-202ENST00000361545 DCAF10Q5QP82 559 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 SLC36A1Q7Z2H8 476 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 MOB3BQ86TA1 216 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 SLC22A18ASQ8N1D0 253 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 OR10V1Q8NGI7 309 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 EDARADDQ8WWZ3 215 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 ZNF416Q9BWM5 594 aa16.59■□□□□ 0.25
CLIP2-202ENST00000361545 CTLA4P16410 223 aa16.58■□□□□ 0.25
CLIP2-202ENST00000361545 PTPMT1Q8WUK0 201 aaPredicted RBP16.58■□□□□ 0.25
CLIP2-202ENST00000361545 A0A1B0GTH9 108 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 SEMG1P04279 462 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 FABP1P07148 127 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 OR10J4P0C629 311 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 HLA-DOBP13765 273 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 PEBP1P30086 187 aaKnown RBP16.58■□□□□ 0.24
CLIP2-202ENST00000361545 RAC3P60763 192 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 PURGQ9UJV8 347 aaKnown RBP16.58■□□□□ 0.24
CLIP2-202ENST00000361545 ZFP92A6NM28 416 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 ARPC3O15145 178 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 SSSCA1O60232 199 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 SNAPINO95295 136 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 IAPPP10997 89 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 EVX1P49640 407 aa16.58■□□□□ 0.24
CLIP2-202ENST00000361545 HFEQ30201 348 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms