RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FBXO17Q96EF6 278 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 AP1S3Q96PC3 154 aa12.05□□□□□ -0.48
LDB3-202ENST00000361373 OR6C68A6NDL8 312 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 GREM1O60565 184 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 JTBO76095 146 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 ZNF32P17041 273 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 GAB4Q2WGN9 574 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 NAA40Q86UY6 237 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
LDB3-202ENST00000361373 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 EML2O95834 649 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 MICBQ29980 383 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 PABPC1L2AQ5JQF8 200 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 TSEN54Q7Z6J9 526 aaKnown RBP12.04□□□□□ -0.48
LDB3-202ENST00000361373 MRGPREQ86SM8 312 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 ATG4DQ86TL0 474 aaPredicted RBP12.04□□□□□ -0.48
LDB3-202ENST00000361373 LY86O95711 162 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 OR10A3P58181 314 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 NKX6-1P78426 367 aaPredicted RBP12.04□□□□□ -0.48
LDB3-202ENST00000361373 VASH2Q86V25 355 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 FAM58AQ8N1B3 248 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 TMEM217Q8N7C4 229 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 TMEM229BQ8NBD8 167 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 SUMF1Q8NBK3 374 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 OR6S1Q8NH40 331 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 MN1Q10571 1320 aaPredicted RBP12.04□□□□□ -0.48
LDB3-202ENST00000361373 A0A0U1RQK1 487 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 A0A1B0GUH1 482 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 GNB3P16520 340 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 MMP15P51511 669 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 ALKAL2Q6UX46 152 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
LDB3-202ENST00000361373 TRBV5-3A0A0A0MS03 114 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 BMP5P22003 454 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 PSMB3P49720 205 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 WDR38Q5JTN6 314 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 MPC1Q9Y5U8 109 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 C9orf152Q5JTZ5 239 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 SPRED2Q7Z698 418 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 PTPMT1Q8WUK0 201 aaPredicted RBP12.03□□□□□ -0.48
LDB3-202ENST00000361373 SARGQ9BW04 601 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 ICAM5Q9UMF0 924 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 LIPT2A6NK58 231 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 IFI6P09912 130 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 FMODQ06828 376 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 DCAF10Q5QP82 559 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 FSCN3Q9NQT6 498 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 TPPPO94811 219 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 WISP3O95389 354 aaPredicted RBP12.03□□□□□ -0.48
LDB3-202ENST00000361373 LALBAP00709 142 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 FCARP24071 287 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 KCNJ3P48549 501 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 UBE2KP61086 200 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 OXA1LQ15070 435 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 SOHLH1Q5JUK2 328 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 EXTL1Q92935 676 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 PPP1R3CQ9UQK1 317 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 CABIN1Q9Y6J0 2220 aa12.03□□□□□ -0.48
LDB3-202ENST00000361373 RER1O15258 196 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 ZNF17P17021 662 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 MDH2P40926 338 aaKnown RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 GPM6AP51674 278 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 SOX8P57073 446 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 BATF2Q8N1L9 274 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 MBD1Q9UIS9 605 aaPredicted RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 CEP290O15078 2479 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 NUDT19A8MXV4 375 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 PATE3B3GLJ2 98 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 PRSS23O95084 383 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 C1QBP02746 253 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 CD3DP04234 171 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 PSMB6P28072 239 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 HRH1P35367 487 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 CDKN2AP42771 156 aaKnown RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 ZNF83P51522 516 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 GNB2P62879 340 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 NHLRC1Q6VVB1 395 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 SLC38A6Q8IZM9 456 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 TERB2Q8NHR7 220 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.48
LDB3-202ENST00000361373 C10orf35Q96D05 121 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 ADGRL4Q9HBW9 690 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 CYSLTR2Q9NS75 346 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 RNF24Q9Y225 148 aa12.02□□□□□ -0.48
LDB3-202ENST00000361373 E5RGE8 158 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 SDCBPO00560 298 aaPredicted RBP12.02□□□□□ -0.49
LDB3-202ENST00000361373 FOXS1O43638 330 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 ERGP11308 486 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 HLA-DOBP13765 273 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 RPA2P15927 270 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
LDB3-202ENST00000361373 KISS1Q15726 138 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 CDONQ4KMG0 1287 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 OR8G2PQ6IF36 304 aa12.02□□□□□ -0.49
LDB3-202ENST00000361373 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms