RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 NANOGP1Q8N7R0 232 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 OR4F5Q8NH21 305 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 OR4F4Q96R69 305 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 C11orf54Q9H0W9 315 aaPredicted RBP18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 GAB2Q9UQC2 676 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 TDRD6O60522 2096 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 WNT1P04628 370 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 SLC36A1Q7Z2H8 476 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 PIK3IP1Q96FE7 263 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 MRGPRX3Q96LB0 322 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 LINC00615Q96LM1 132 aaPredicted RBP18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 PRRX2Q99811 253 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 SCN1AP35498 2009 aa18.21■□□□□ 0.51
CDC42BPB-201ENST00000361246 IGHV3OR15-7A0A075B7D8 119 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 IGHV5-10-1A0A0J9YXX1 117 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 PPP3CBP16298 524 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 MAGEB1P43366 347 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 PPP1CBP62140 327 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 SNTB1Q13884 538 aaKnown RBP18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 SLC17A1Q14916 467 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 LINC01555Q8NAE3 123 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 PSENENQ9NZ42 101 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 TCFL5Q9UL49 500 aa18.21■□□□□ 0.5
CDC42BPB-201ENST00000361246 RHOBP62745 196 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 AKR1E2Q96JD6 320 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 FLVCR2Q9UPI3 526 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 PIGPP57054 158 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 KLF3P57682 345 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 DGCR2P98153 550 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 ADGRG3Q86Y34 549 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR10R2Q8NGX6 335 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 B9D1Q9UPM9 204 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 STPG1Q5TH74 334 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 LRRC29Q8WV35 223 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 MBD1Q9UIS9 605 aaPredicted RBP18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 LRP12Q9Y561 859 aa18.2■□□□□ 0.5
CDC42BPB-201ENST00000361246 RFX2P48378 723 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 SNRPNP63162 240 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 RNPS1Q15287 305 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 RGPD4Q7Z3J3 1758 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 ATP1B1P05026 303 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 FGF7P21781 194 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 OPRK1P41145 380 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 GUCA2AQ02747 115 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF767PQ75MW2 155 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 DND1Q8IYX4 353 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 LIN7CQ9NUP9 197 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 TCAPO15273 167 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 LRP3O75074 770 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 GAMTQ14353 236 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 FCN2Q15485 313 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 TMEM102Q8N9M5 508 aaPredicted RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 DPF1Q92782 380 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 NDFIP1Q9BT67 221 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 SPAG17Q6Q759 2223 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 A0A0D9SG52 128 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 CHEK1O14757 476 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 PABPC1L2AQ5JQF8 200 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 RFPL4BQ6ZWI9 263 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 AK3Q9UIJ7 227 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 TMEM267Q0VDI3 215 aaPredicted RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 WFDC3Q8IUB2 231 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 ARHGEF39Q8N4T4 335 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 DOK5Q9P104 306 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 BTN1A1Q13410 526 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR5B3Q8NH48 314 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 MCHR2Q969V1 340 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 APOBEC3DQ96AK3 386 aaPredicted RBP18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 TAAR6Q96RI8 345 aa18.19■□□□□ 0.5
CDC42BPB-201ENST00000361246 HAX1O00165 279 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 DRD3P35462 400 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF266Q14584 549 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 PDZD11Q5EBL8 140 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR52N1Q8NH53 320 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 SLC7A6Q92536 515 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 FAM122AQ96E09 287 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ICAM5Q9UMF0 924 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 PDGFBP01127 241 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 SMIM17P0DL12 118 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ARRB2P32121 409 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ACSM6Q6P461 480 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 BLNKQ8WV28 456 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 FCGR3BO75015 233 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 KRASP01116 189 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 EGR3Q06889 387 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 MARCH1Q8TCQ1 289 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 SEH1LQ96EE3 360 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 UBE2L5PA0A1B0GUS4 154 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ADAM20O43506 726 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 MGMTP16455 207 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 ZNF32P17041 273 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 OR10P1Q8NGE3 313 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 FCRL1Q96LA6 429 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 PSG11Q9UQ72 335 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 A1L4Q6 167 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 CTU2Q2VPK5 515 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 SFTPA2Q8IWL1 248 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 PLXNB2O15031 1838 aa18.18■□□□□ 0.5
CDC42BPB-201ENST00000361246 CT62P0C5K7 136 aa18.17■□□□□ 0.5
CDC42BPB-201ENST00000361246 FAM27D1Q5T7N8 215 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms