RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.61
VPS29-201ENST00000360579 CXCR6O00574 342 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 GSTA4O15217 222 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 ST8SIA5O15466 376 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 IDH3BO43837 385 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 MPIG6BO95866 241 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 HIST1H1CP16403 213 aaKnown RBP11.27□□□□□ -0.61
VPS29-201ENST00000360579 FAHP16930 419 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 ELF3P78545 371 aaPredicted RBP11.27□□□□□ -0.61
VPS29-201ENST00000360579 CRIP3Q6Q6R5 217 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 LYG1Q8N1E2 194 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 CYB561A3Q8NBI2 242 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 COPS4Q9BT78 406 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 IFT27Q9BW83 186 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 MRPL22Q9NWU5 206 aaKnown RBP11.27□□□□□ -0.61
VPS29-201ENST00000360579 HAO2Q9NYQ3 351 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 ADA2Q9NZK5 511 aa11.27□□□□□ -0.61
VPS29-201ENST00000360579 SLC25A10Q9UBX3 287 aaPredicted RBP11.27□□□□□ -0.61
VPS29-201ENST00000360579 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 H0YAE9 185 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 CDIPTO14735 213 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 EDF1O60869 148 aaKnown RBP11.26□□□□□ -0.61
VPS29-201ENST00000360579 SERPINA1P01009 418 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 VSIG8P0DPA2 414 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 RHCEP18577 417 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 POU1F1P28069 291 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 GNALP38405 381 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 CAV3P56539 151 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 CSNK2BP67870 215 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 KLF10Q13118 480 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 TAF13Q15543 124 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 SNCBQ16143 134 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 WDR86Q86TI4 376 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 FTMTQ8N4E7 242 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 OR10Z1Q8NGY1 313 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 RORBQ92753 470 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 DUS3LQ96G46 650 aaKnown RBP11.26□□□□□ -0.61
VPS29-201ENST00000360579 ATP6V1G3Q96LB4 118 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 KCNJ15Q99712 375 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 TLNRD1Q9H1K6 362 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 OR52D1Q9H346 318 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 SP140LQ9H930 580 aa11.26□□□□□ -0.61
VPS29-201ENST00000360579 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 LOC100653049A0A140TA62 436 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 OR6C68A6NDL8 312 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 ANGPTL7O43827 346 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 PEX14O75381 377 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 KRT34O76011 436 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 CD28P10747 220 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 NDUFB7P17568 137 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 AMY2BP19961 511 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 CD33P20138 364 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 CFL1P23528 166 aaKnown RBP11.25□□□□□ -0.61
VPS29-201ENST00000360579 PRKXP51817 358 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 IL5RAQ01344 420 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 LIPEQ05469 1076 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 ZDHHC21Q8IVQ6 265 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 PAPD5Q8NDF8 572 aaKnown RBP11.25□□□□□ -0.61
VPS29-201ENST00000360579 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 SDR9C7Q8NEX9 313 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 OR5T2Q8NGG2 359 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 C17orf50Q8WW18 174 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 SEH1LQ96EE3 360 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 RAB3IPQ96QF0 476 aaPredicted RBP11.25□□□□□ -0.61
VPS29-201ENST00000360579 NKX3-1Q99801 234 aaPredicted RBP11.25□□□□□ -0.61
VPS29-201ENST00000360579 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 CDCA4Q9BXL8 241 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 ZNF391Q9UJN7 358 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 N6AMT1Q9Y5N5 214 aa11.25□□□□□ -0.61
VPS29-201ENST00000360579 TRBV4-1A0A0J9YWV2 114 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 GLCEO94923 617 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SLC2A1P11166 492 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SELLP14151 372 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 ANOS1P23352 680 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SLC15A1P46059 708 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 FAM3AP98173 230 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SPIBQ01892 262 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 KRT72Q14CN4 511 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SEC23BQ15437 767 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 DGUOKQ16854 277 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 TIGD6Q17RP2 521 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 ZBTB37Q5TC79 503 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 HCP5Q6MZN7 132 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 SLC16A9Q7RTY1 509 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 Q8N2B8 174 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 CSNK2A3Q8NEV1 391 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 PROKR2Q8NFJ6 384 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 FAM162AQ96A26 154 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 WWC2-AS2Q96NR7 200 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
VPS29-201ENST00000360579 CITED2Q99967 270 aaPredicted RBP11.24□□□□□ -0.61
VPS29-201ENST00000360579 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms