RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 BCL6P41182 706 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 MED25Q71SY5 747 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 OLIG1Q8TAK6 271 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 ZNF835Q9Y2P0 537 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 MBTPS2O43462 519 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 TBXA2RP21731 343 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 GJA4P35212 333 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 LIMK1P53667 647 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 HLXQ14774 488 aaPredicted RBP11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 FDX2Q6P4F2 183 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 TCFL5Q9UL49 500 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 TMEM81Q6P7N7 255 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 BTLAQ7Z6A9 289 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 ZNF547Q8IVP9 402 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 SOX15O60248 233 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 TMEM241Q24JQ0 296 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 RPEL1Q2QD12 228 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 SSX8Q7RTT4 187 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 ST8SIA1Q92185 356 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 RCL1Q9Y2P8 373 aaKnown RBP11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 ZC3H12DA2A288 527 aaKnown RBP11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 RAB29O14966 203 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 GLRA1P23415 457 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 C6orf15Q6UXA7 325 aaPredicted RBP11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 OR4C16Q8NGL9 310 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 HGDQ93099 445 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 ADGRL4Q9HBW9 690 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 VMA21Q3ZAQ7 101 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 KIAA2026Q5HYC2 2103 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 OPALINQ96PE5 141 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 TMEM147Q9BVK8 224 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 LANCL2Q9NS86 450 aa11.99□□□□□ -0.49
SRGAP3-201ENST00000360413 FBLL1A6NHQ2 334 aaKnown RBP11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CTNSO60931 367 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CARFQ8N187 725 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 LINC00052Q96N35 136 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 OR52A4PA6NMU1 304 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 EPHA2P29317 976 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CEACAM3P40198 252 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PAX5Q02548 391 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 DHRS4L2Q6PKH6 230 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PAQR6Q6TCH4 344 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 GLDNQ6ZMI3 551 aaPredicted RBP11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 BATF2Q8N1L9 274 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 OCIAD1Q9NX40 245 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PAM16Q9Y3D7 125 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 SLCO1B1Q9Y6L6 691 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PYCARD-AS1I3L0S3 204 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CTSFQ9UBX1 484 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 FOXJ3Q9UPW0 622 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 NTNG1Q9Y2I2 539 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PRSS21Q9Y6M0 314 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 IFITM5A6NNB3 132 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CCL11P51671 97 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 C1orf220Q5T0J3 134 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 DOLPP1Q86YN1 238 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 DOCK6Q96HP0 2047 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 K7EQS6 105 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 GPR37O15354 613 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CD99P14209 185 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 LYPD8Q6UX82 237 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 OR51F2Q8NH61 342 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 ZNF480Q8WV37 535 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PCMT1P22061 227 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 OR10J1P30954 320 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 JAG1P78504 1218 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 COL5A1-AS1Q5SY13 56 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 OR5R1Q8NH85 324 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 RTN4IP1Q8WWV3 396 aaPredicted RBP11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 GABARAPL3Q9BY60 117 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 IL17CQ9P0M4 197 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 NRASP01111 189 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 GPNMBQ14956 572 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 ARHGEF39Q8N4T4 335 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 SLCO4A1Q96BD0 722 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 TEAD3Q99594 435 aa11.98□□□□□ -0.49
SRGAP3-201ENST00000360413 CLEC18AA5D8T8 446 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 CDC34P49427 236 aaPredicted RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 SUCLG1P53597 346 aaKnown RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 PRAMEF20Q5VT98 475 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 EXD3Q8N9H8 876 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 CLEC18CQ8NCF0 446 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 ZNF775Q96BV0 537 aaPredicted RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 TRMT12Q53H54 448 aaKnown RBP11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 OR2B11Q5JQS5 317 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 C1orf140Q5VVS0 124 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 CAMKMTQ7Z624 323 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 NPAS1Q99742 590 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 AP5S1Q9NUS5 200 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 WASHC3Q9Y3C0 194 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 OR2T8A6NH00 312 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 FZD6O60353 706 aa11.97□□□□□ -0.49
SRGAP3-201ENST00000360413 PELI3Q8N2H9 469 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms