RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GALMQ96C23 342 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CHRDL1Q9BU40 450 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 TXNIPQ9H3M7 391 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 DUSP22Q9NRW4 184 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 LSM2Q9Y333 95 aaKnown RBP14.48□□□□□ -0.09
COL18A1-203ENST00000359759 NEURL1O76050 574 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 F11P03951 625 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 SLC25A5P05141 298 aaKnown RBP14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CTSLP07711 333 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 FAHP16930 419 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 GUK1Q16774 197 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 NKAIN1Q4KMZ8 207 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 OR1L4Q8NGR5 311 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 LAT2Q9GZY6 243 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 C6orf106Q9H6K1 298 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-203ENST00000359759 POMT1Q9Y6A1 747 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CD1EP15812 388 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 SPRY3O43610 288 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CXCL13O43927 109 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 ZP3P21754 424 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 GALNT16Q8N428 558 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 MMP24Q9Y5R2 645 aa14.48□□□□□ -0.09
COL18A1-203ENST00000359759 CLDN15P56746 228 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 SHBQ15464 509 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 PLA1AQ53H76 456 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 C19orf35Q6ZS72 473 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 LSRQ86X29 649 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 CXorf58Q96LI9 332 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 OXGR1Q96P68 337 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 C20orf141Q9NUB4 165 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 ZBTB42B2RXF5 422 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 GOSR1O95249 250 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 IL5P05113 134 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 PSMB2P49721 201 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 SHISA8B8ZZ34 492 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 RPL29P47914 159 aaKnown RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 NOVA1P51513 510 aaKnown RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 FGF8P55075 233 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 TIAL1Q01085 375 aaKnown RBP eCLIP14.47□□□□□ -0.092e-6■■■□□ 16
COL18A1-203ENST00000359759 FAM219BQ5XKK7 198 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 C20orf196Q8IYI0 205 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 BCL2L2Q92843 193 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 MMP7P09237 267 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 ERVS71-1P61550 626 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 CA13Q8N1Q1 262 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 THAP10Q9P2Z0 257 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 ZNF154Q13106 437 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 B3GNT9Q6UX72 402 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-203ENST00000359759 POM121L2Q96KW2 1035 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 FGF22Q9HCT0 170 aa14.47□□□□□ -0.09
COL18A1-203ENST00000359759 CHD2O14647 1828 aaKnown RBP14.46□□□□□ -0.09
COL18A1-203ENST00000359759 HPP00738 406 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 ADPRHP54922 357 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 MYBPHQ13203 477 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 CLDN23Q96B33 292 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 ZNF195O14628 629 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 KRASP01116 189 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 CCKARP32238 428 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 MEOX1P50221 254 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 PJVKQ0ZLH3 352 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 ZDHHC5Q9C0B5 715 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 MARCH5Q9NX47 278 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 DOK5Q9P104 306 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 H3BMH7 237 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 COL13A1Q5TAT6 717 aaPredicted RBP14.46□□□□□ -0.09
COL18A1-203ENST00000359759 FAM24BQ8N5W8 94 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 TMEM229BQ8NBD8 167 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 ADPRHL1Q8NDY3 354 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 AKIP1Q9NQ31 210 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 OPRK1P41145 380 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 ICAM5Q9UMF0 924 aa14.46□□□□□ -0.09
COL18A1-203ENST00000359759 EPXP11678 715 aa14.46□□□□□ -0.1
COL18A1-203ENST00000359759 CD22P20273 847 aa14.46□□□□□ -0.1
COL18A1-203ENST00000359759 AAMDCQ9H7C9 122 aa14.46□□□□□ -0.1
COL18A1-203ENST00000359759 OR2W5A6NFC9 320 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 AQP6Q13520 282 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 ELFN2Q5R3F8 820 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 ZBTB37Q5TC79 503 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 PARM1Q6UWI2 310 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 C16orf52Q8NHV5 167 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 HES4Q9HCC6 221 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 ADAM20O43506 726 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 CHRNA7P36544 502 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 CDC20Q12834 499 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 CLN3Q13286 438 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 TOMM34Q15785 309 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-203ENST00000359759 PYCR3Q53H96 274 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 CCL4L1Q8NHW4 92 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 IDSB3KWA1 339 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 C11orf91Q3C1V1 193 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 OR5D13Q8NGL4 314 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 H3BVH4 76 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 PRRG2O14669 202 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 TOX3O15405 576 aaPredicted RBP14.45□□□□□ -0.1
COL18A1-203ENST00000359759 TNFRSF12AQ9NP84 129 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 EPHA2P29317 976 aa14.45□□□□□ -0.1
COL18A1-203ENST00000359759 SLC37A1P57057 533 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms