RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 DEFB108AA8MXU0 73 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 RAB5AP20339 215 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM88Q6PEY1 159 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 RTN4IP1Q8WWV3 396 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-202ENST00000359082 DPF1Q92782 380 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 ADGRL4Q9HBW9 690 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 B9D1Q9UPM9 204 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 NDUFB3O43676 98 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 SCO1O75880 301 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 HPP00738 406 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 OR2T2Q6IF00 324 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 SPNP16150 400 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 DSCR4P56555 118 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-202ENST00000359082 MAMSTRQ6ZN01 415 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.55■□□□□ 0.24
SHANK1-202ENST00000359082 YIPF6Q96EC8 236 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM9BQ9NQ34 198 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 A0A1B0GUH1 482 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 SCGB1C2P0DMR2 95 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 S100A4P26447 101 aaKnown RBP16.55■□□□□ 0.24
SHANK1-202ENST00000359082 EVX1P49640 407 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 CAMKMTQ7Z624 323 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 TNFRSF12AQ9NP84 129 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 KLK11Q9UBX7 282 aa16.55■□□□□ 0.24
SHANK1-202ENST00000359082 TMPRSS11FQ6ZWK6 438 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 RIMKLAQ8IXN7 391 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 PPP1R1CQ8WVI7 109 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 PLSCR3Q9NRY6 295 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 PLA2G3Q9NZ20 509 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 COL16A1Q07092 1604 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-202ENST00000359082 HSPB2A8KAH6 182 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 PMCHP20382 165 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 HSPB2Q16082 182 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 PLA1AQ53H76 456 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 FBXL6Q8N531 539 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 UBALD1Q8TB05 177 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 BCL7CQ8WUZ0 217 aaPredicted RBP16.54■□□□□ 0.24
SHANK1-202ENST00000359082 BCL2L11O43521 198 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 SMAD4Q13485 552 aaKnown RBP16.54■□□□□ 0.24
SHANK1-202ENST00000359082 CEACAM16Q2WEN9 425 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 FAM162BQ5T6X4 162 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 DERL3Q96Q80 235 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 LAMP3Q9UQV4 416 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 C2CD4DB7Z1M9 353 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 CLEC9AQ6UXN8 241 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 UBE3DQ7Z6J8 389 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 RAB18Q9NP72 206 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 LRP12Q9Y561 859 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 CBY3A6NI87 242 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 CBR3O75828 277 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 S100A8P05109 93 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 ZNF596Q8TC21 504 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 C12orf57Q99622 126 aa16.54■□□□□ 0.24
SHANK1-202ENST00000359082 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 DHRS7BQ6IAN0 325 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM229BQ8NBD8 167 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 DHHO43323 396 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM18Q96B42 140 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 KTI12Q96EK9 354 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 DUS4LO95620 317 aaKnown RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TPPP2P59282 170 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TPBGQ13641 420 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 OR1C1Q15619 314 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 FBXL14Q8N1E6 418 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 OR2G2Q8NGZ5 317 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 CHRDL1Q9BU40 450 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 MAST2Q6P0Q8 1798 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 GPANK1O95872 356 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 CRYBA1P05813 215 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 SPP1P10451 314 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 THBS4P35443 961 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 LIMK1P53667 647 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 WDR89Q96FK6 387 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 UCK1Q9HA47 277 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TNFRSF19Q9NS68 423 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 SFTA3P0C7M3 94 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 USF1P22415 310 aaPredicted RBP16.53■□□□□ 0.24
SHANK1-202ENST00000359082 ACVR1Q04771 509 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 FA2HQ7L5A8 372 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 EDARADDQ8WWZ3 215 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TMPRSS13Q9BYE2 586 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 TRAPPC1Q9Y5R8 145 aa16.53■□□□□ 0.24
SHANK1-202ENST00000359082 ANKRD36CQ5JPF3 1778 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 MKRN2OSH3BPM6 223 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 EDIL3O43854 480 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 CST7O76096 145 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 ZXDAP98168 799 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 CLEC1BQ9P126 229 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 TMEM30CPA0ZSE6 113 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 M0R1X1 148 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 TO15178 435 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 BAP18Q8IXM2 172 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 A0A0A6YYD5 115 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 SNRPGP15A8MWD9 76 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 ACSM4P0C7M7 580 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 SRFP11831 508 aa16.52■□□□□ 0.24
SHANK1-202ENST00000359082 CEACAM6P40199 344 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms