RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 TMEM163Q8TC26 289 aa17.1■□□□□ 0.33
PPP1CA-202ENST00000358239 RAB40AQ8WXH6 277 aa17.1■□□□□ 0.33
PPP1CA-202ENST00000358239 LRTOMTQ8WZ04 291 aa17.1■□□□□ 0.33
PPP1CA-202ENST00000358239 NUP50Q9UKX7 468 aa17.1■□□□□ 0.33
PPP1CA-202ENST00000358239 FBN3Q75N90 2809 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 A0A0U1RQV5 110 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 hCG_1807616A0A1W2PRN6 198 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 CST4P01036 141 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 LHBP01229 141 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 MRPL3P09001 348 aaKnown RBP17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 WDR25Q64LD2 544 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 GID4Q8IVV7 300 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 ZNF679Q8IYX0 411 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 GALNT4Q8N4A0 578 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 GCSAMQ8N6F7 178 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 TCEANCQ8N8B7 351 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 OR1M1Q8NGA1 313 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 OR8B12Q8NGG6 310 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 DACT3Q96B18 629 aaPredicted RBP17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 OR8B4Q96RC9 309 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 MICU1Q9BPX6 476 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 RTL8AQ9BWD3 113 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 ERVK-18Q9QC07 812 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 RHBDD3Q9Y3P4 386 aa17.09■□□□□ 0.33
PPP1CA-202ENST00000358239 KIR2DS1A0A191URI9 304 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 TMEM269A0A1B0GVZ9 245 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 TRIM77I1YAP6 450 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 EPHA2P29317 976 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 CD80P33681 288 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 HCCSP53701 268 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 ACTR3P61158 418 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 C11orf91Q3C1V1 193 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF829Q3KNS6 432 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 AADACL4Q5VUY2 407 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 TEX36Q5VZQ5 186 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 CD276Q5ZPR3 534 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 SFRP4Q6FHJ7 346 aaPredicted RBP17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 LYPD2Q6UXB3 125 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF826PQ6ZT77 177 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 BOLLQ8N9W6 283 aaKnown RBP17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 C19orf18Q8NEA5 215 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 ITPKCQ96DU7 683 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 CIB1Q99828 191 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 SLC6A7Q99884 636 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 TLNRD1Q9H1K6 362 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 HAO2Q9NYQ3 351 aa17.08■□□□□ 0.32
PPP1CA-202ENST00000358239 TENM1Q9UKZ4 2725 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 TMEM210A6NLX4 147 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 C3orf80F5H4A9 247 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 MUC1P15941 1255 aaPredicted RBP17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 RIDAP52758 137 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF841Q6ZN19 808 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 WDR86Q86TI4 376 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 NUDT16L1Q9BRJ7 211 aaKnown RBP17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 GABARAPL3Q9BY60 117 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 SEMA6AQ9H2E6 1030 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 FAM206AQ9NX38 181 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 OAZ3Q9UMX2 235 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 ANK2Q01484 3957 aa17.07■□□□□ 0.32
PPP1CA-202ENST00000358239 ENSAO43768 121 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 ATP6V1B1P15313 513 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 ACKR3P25106 362 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 CFHR2P36980 270 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 MAP2K3P46734 347 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 PRDX4Q13162 271 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 WDR82Q6UXN9 313 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 RBMS3Q6XE24 437 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 CCDC121Q6ZUS5 278 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 KRT74Q7RTS7 529 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 C11orf53Q8IXP5 236 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 FAM81AQ8TBF8 368 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 FAM216AQ8WUB2 273 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 LRRC29Q8WV35 223 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 OR5P3Q8WZ94 311 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 UPRTQ96BW1 309 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 C12orf43Q96C57 262 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 LYZL4Q96KX0 146 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 TECTBQ96PL2 329 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 RBM4BQ9BQ04 359 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 MOB1AQ9H8S9 216 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 ADGRL4Q9HBW9 690 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 CLN6Q9NWW5 311 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 KAAG1Q9UBP8 84 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 WARS2Q9UGM6 360 aaKnown RBP17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 IKZF2Q9UKS7 526 aa17.06■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF816-ZNF321PA0A0X1KG74 233 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF850A8MQ14 1090 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 TNFRSF13BO14836 293 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 ADAM20O43506 726 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 RGS9O75916 674 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 LIPFP07098 398 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 EGR3Q06889 387 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 MICBQ29980 383 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 TUSC1Q2TAM9 212 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 KLF17Q5JT82 389 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 ZNF322Q6U7Q0 402 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 FAM90A1Q86YD7 464 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 SLC35F2Q8IXU6 374 aa17.05■□□□□ 0.32
PPP1CA-202ENST00000358239 C10orf67Q8IYJ2 551 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms