RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CD5P06127 495 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 HLA-DOBP13765 273 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM11P17152 192 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 MSX1P28360 303 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 ARRB1P49407 418 aaPredicted RBP7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 NPY4RP50391 375 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF84P51523 738 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF117Q03924 483 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 HNF4GQ14541 408 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 KHDC3LQ587J8 217 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 LPCAT3Q6P1A2 487 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR13C9Q8NGT0 318 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 RNF128Q8TEB7 428 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 ELSPBP1Q96BH3 223 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM208Q9BTX3 173 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 C1orf198Q9H425 327 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 CNTD2Q9H8S5 307 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 PRODH2Q9UF12 536 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 A0A1W2PQF6 199 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 LINC00614P0C842 121 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 FAM157CP0CG43 387 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 THEGLP0DJG4 465 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 PSMB6P28072 239 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 CD200P41217 278 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 SULT1A1P50225 295 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 HLA-DQA1Q5Y7H0 255 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 PPP1R3BQ86XI6 285 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 BHLHE23Q8NDY6 225 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR52N4Q8NGI2 321 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 SECTM1Q8WVN6 248 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 TSLPQ969D9 159 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 CYYR1Q96J86 154 aa7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 CCNL2Q96S94 520 aaPredicted RBP7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 METTL8Q9H825 291 aaKnown RBP7.34□□□□□ -1.23
CDC42SE1-201ENST00000357235 A0A1W2PPE2 198 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 C9JQL5 133 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 H0YIG0 161 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 FBXO24O75426 580 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 TNFP01375 233 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OPN1LWP04000 364 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SERPINA5P05154 406 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 FABP4P15090 132 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 DVL1P1P54792 670 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SCAND1P57086 179 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 RPL27P61353 136 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 EIF5AP63241 154 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NAAAQ02083 359 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 AKR1C8PQ5T2L2 129 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 AWAT2Q6E213 333 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF574Q6ZN55 896 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SHISA6Q6ZSJ9 500 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 LANCL3Q6ZV70 420 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 TTLL10Q6ZVT0 673 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR2I1PQ8NGU4 316 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 THAP3Q8WTV1 239 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SAT2Q96F10 170 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MRGPRX1Q96LB2 322 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 DDA1Q9BW61 102 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR52A1Q9UKL2 312 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 YBX2Q9Y2T7 364 aaKnown RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 WDFY3Q8IZQ1 3526 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 A0A1B0GTI1 187 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 CRHP06850 196 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NPSP0C0P6 89 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 H2BFMP0C1H6 154 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 FGF7P21781 194 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZBTB25P24278 435 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 AKT2P31751 481 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 FOXL2P58012 376 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 HSD11B2P80365 405 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MEF2DQ14814 521 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZNF615Q8N8J6 731 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR10AD1Q8NGE0 317 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR1J1Q8NGS3 322 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 OR5R1Q8NH85 324 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 ASB17Q8WXJ9 295 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 EDAQ92838 391 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NUDT22Q9BRQ3 303 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NICN1Q9BSH3 213 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 EMC6Q9BV81 110 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 BANF2Q9H503 90 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MED29Q9NX70 200 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 POLR1DQ9Y2S0 133 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 WIF1Q9Y5W5 379 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SMCO3A2RU48 225 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MSGN1A6NI15 193 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 F8VVB4 439 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 F8VWA3 439 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 MPIG6BO95866 241 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 TXNDC12O95881 172 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 SFTPBP07988 381 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 GP1BBP13224 206 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 IL11P20809 199 aa7.33□□□□□ -1.24
CDC42SE1-201ENST00000357235 NKX6-1P78426 367 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms