RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 FAM3DQ96BQ1 224 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 MUCL1Q96DR8 90 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 SPACA5Q96QH8 159 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 CNTD2Q9H8S5 307 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 TMEM165Q9HC07 324 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 GPR173Q9NS66 373 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 ZNF816-ZNF321PA0A0X1KG74 233 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 GGT3PA6NGU5 568 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 PRF1P14222 555 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 AZGP1P25311 298 aaKnown RBP11.76□□□□□ -0.53
HOXA1-202ENST00000355633 POU3F4P49335 361 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 IL18Q14116 193 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 HLXQ14774 488 aaPredicted RBP11.76□□□□□ -0.53
HOXA1-202ENST00000355633 DMRTC1Q5HYR2 192 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 CLVS2Q5SYC1 327 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 ZBTB37Q5TC79 503 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 OR4M1Q8NGD0 313 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 OR4D6Q8NGJ1 314 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 RHBDD3Q9Y3P4 386 aa11.76□□□□□ -0.53
HOXA1-202ENST00000355633 IGHV1-18A0A0C4DH31 117 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 LOC100289279A0A1B0GTE1 492 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 A0A1B0GVG6 124 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 GMDSO60547 372 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 ARSBP15848 533 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 PPA1Q15181 289 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 CNN3Q15417 329 aaKnown RBP11.75□□□□□ -0.53
HOXA1-202ENST00000355633 TAB1Q15750 504 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 C2orf76Q3KRA6 126 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 TMEM42Q69YG0 159 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 SNX29P2Q8IUI4 249 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 SYNPRQ8TBG9 265 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 SOSTQ9BQB4 213 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 KCNN3Q9UGI6 736 aa11.75□□□□□ -0.53
HOXA1-202ENST00000355633 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 TPD52L2O43399 206 aaKnown RBP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 NRASP01111 189 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ZNF35P13682 527 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ART1P52961 327 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 UCP2P55851 309 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PPP1CBP62140 327 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 RIN1Q13671 783 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ALKBH2Q6NS38 261 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 UNQ6126/PRO20091Q6UXV3 157 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CMTM4Q8IZR5 234 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 DTX3Q8N9I9 347 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 SSC4DQ8WTU2 575 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PIGCQ92535 297 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PIGTQ969N2 578 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 SPSB1Q96BD6 273 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 GPER1Q99527 375 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CCDC32Q9BV29 185 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 NEK6Q9HC98 313 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 SPTA1P02549 2419 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 RP1L1Q8IWN7 2480 aaPredicted RBP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 UPK1BO75841 260 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CCKARP32238 428 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ZNF83P51522 516 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CAPZA1P52907 286 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 KISS1Q15726 138 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 C3orf36Q3SXR2 165 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PYDC2Q56P42 97 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 SPATA46Q5T0L3 261 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 FTMTQ8N4E7 242 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PNLDC1Q8NA58 520 aaKnown RBP11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 OR1J1Q8NGS3 322 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 UBASH3BQ8TF42 649 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 RAB40AQ8WXH6 277 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 CCDC120Q96HB5 630 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 TECTBQ96PL2 329 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 KCNK15Q9H427 330 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 PPP1R3EQ9H7J1 279 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ABCB10Q9NRK6 738 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 RHBDL2Q9NX52 303 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 ATRXP46100 2492 aa11.74□□□□□ -0.53
HOXA1-202ENST00000355633 IGHV2OR16-5A0A0B4J2B6 119 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 TMEM272A0A1B0GTI8 110 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 CD300LBA8K4G0 201 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 M0R1B8 84 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 PRKACBP22694 351 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 RAD52P43351 418 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 ZNF181Q2M3W8 571 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 AWAT2Q6E213 333 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 FBXW12Q6X9E4 464 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 MOB3CQ70IA8 216 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 ANGPTL5Q86XS5 388 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 GDPD1Q8N9F7 314 aa11.73□□□□□ -0.53
HOXA1-202ENST00000355633 S100A16Q96FQ6 103 aaKnown RBP11.73□□□□□ -0.53
HOXA1-202ENST00000355633 PAPOLGQ9BWT3 736 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms