RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 RIN1Q13671 783 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 HLXQ14774 488 aaPredicted RBP17.74■□□□□ 0.43
TRIM4-202ENST00000354241 PYHIN1Q6K0P9 492 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 RFPL4BQ6ZWI9 263 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 PIGTQ969N2 578 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 REPIN1Q9BWE0 567 aaKnown RBP17.74■□□□□ 0.43
TRIM4-202ENST00000354241 OBP2BQ9NPH6 170 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 MYEF2Q9P2K5 600 aaKnown RBP17.74■□□□□ 0.43
TRIM4-202ENST00000354241 EIF3KQ9UBQ5 218 aaKnown RBP17.74■□□□□ 0.43
TRIM4-202ENST00000354241 AMDHD2Q9Y303 409 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 MYO7BQ6PIF6 2116 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 TRGV8A0A0C4DH27 118 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 CSF3P09919 207 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 PRF1P14222 555 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 CLVS2Q5SYC1 327 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 BAIAP2L2Q6UXY1 529 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 CDH26Q8IXH8 852 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 HAVCR1Q96D42 359 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 TBCCD1Q9NVR7 557 aa17.74■□□□□ 0.43
TRIM4-202ENST00000354241 ZNF629Q9UEG4 869 aaPredicted RBP17.74■□□□□ 0.43
TRIM4-202ENST00000354241 ISPDA4D126 451 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 GGT3PA6NGU5 568 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 A8MXE2 369 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 GMDSO60547 372 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 ALX3O95076 343 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 IGKV3-15P01624 115 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 NR4A2P43354 598 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 OR3A4PP47883 348 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 AWAT2Q6E213 333 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 OR56B2PQ8NGI1 322 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 OR5L1Q8NGL2 311 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 RFT1Q96AA3 541 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 S100PBPQ96BU1 408 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 ABHD1Q96SE0 405 aa17.73■□□□□ 0.43
TRIM4-202ENST00000354241 ZNF816-ZNF321PA0A0X1KG74 233 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 A0A1B0GVG6 124 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 A0A1W2PQ09 198 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 NRASP01111 189 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 CASP6P55212 293 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 PITPNAQ00169 270 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 CNN3Q15417 329 aaKnown RBP17.72■□□□□ 0.43
TRIM4-202ENST00000354241 TRIQKQ629K1 86 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 ANGPTL5Q86XS5 388 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 POC5Q8NA72 575 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 ST6GALNAC3Q8NDV1 305 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 PIGCQ92535 297 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 KCNN3Q9UGI6 736 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 MRPS28Q9Y2Q9 187 aaKnown RBP17.72■□□□□ 0.43
TRIM4-202ENST00000354241 FAM157BP0CG42 384 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 CDK2P24941 298 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 KISS1Q15726 138 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 TAB1Q15750 504 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 TMEM69Q5SWH9 247 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 OR10K2Q6IF99 312 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 MRGPRGQ86SM5 289 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 PNLDC1Q8NA58 520 aaKnown RBP17.72■□□□□ 0.43
TRIM4-202ENST00000354241 SSC4DQ8WTU2 575 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 VKORC1Q9BQB6 163 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 OPA3Q9H6K4 179 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 SLC25A15Q9Y619 301 aa17.72■□□□□ 0.43
TRIM4-202ENST00000354241 SHANK1Q9Y566 2161 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 RP1L1Q8IWN7 2480 aaPredicted RBP17.71■□□□□ 0.43
TRIM4-202ENST00000354241 SMPD2O60906 423 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 BPNT1O95861 308 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 PSMB1P20618 241 aaKnown RBP17.71■□□□□ 0.43
TRIM4-202ENST00000354241 CAPZA1P52907 286 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 DEFA1P59665 94 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 DEFA3P59666 94 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 SPATA46Q5T0L3 261 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 TMEM42Q69YG0 159 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 ALKBH2Q6NS38 261 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 MOB3CQ70IA8 216 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 LIX1LQ8IVB5 337 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 OR5D18Q8NGL1 313 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 RND1Q92730 232 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 CCDC120Q96HB5 630 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 GAL3ST1Q99999 423 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 ATG5Q9H1Y0 275 aa17.71■□□□□ 0.43
TRIM4-202ENST00000354241 LINC00854A0A1B0GVQ3 168 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 FAM230AA0A1W2PPH8 454 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 ERVH48-1M5A8F1 160 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 CTAG2O75638 210 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 SCN1BQ07699 218 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 FAM27E3Q08E93 113 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 RNASE12Q5GAN4 147 aaKnown RBP17.7■□□□□ 0.42
TRIM4-202ENST00000354241 TIMM23BQ5SRD1 257 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 ZBTB37Q5TC79 503 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 PLCXD3Q63HM9 321 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 TMEM211Q6ICI0 200 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 GLIPR1L1Q6UWM5 242 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 CENPSQ8N2Z9 138 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 UBASH3BQ8TF42 649 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 PHF21AQ96BD5 680 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 SPSB1Q96BD6 273 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 NEK6Q9HC98 313 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 J3QW42 95 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 LDLRAD4O15165 306 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 CECR9P0C854 216 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 PRKACBP22694 351 aa17.7■□□□□ 0.42
TRIM4-202ENST00000354241 PPP1CBP62140 327 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms