RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 A0A0J9YY10 115 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 LRRC30A6NM36 301 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 ZBTB42B2RXF5 422 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL6A3-203ENST00000353578 PSMB2P49721 201 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 CTBSQ01459 385 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 PDCD1LG2Q9BQ51 273 aa11.45□□□□□ -0.58
COL6A3-203ENST00000353578 MYOGP15173 224 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 Q6ZVL8 140 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 DOLPP1Q86YN1 238 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 A0A1W2PNV4 684 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 SERF2P84101 59 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 OR7A5Q15622 319 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 OR8G5Q8NG78 346 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 P4HTMQ9NXG6 502 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 SERINC4A6NH21 518 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 MMP9P14780 707 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 JOSD1Q15040 202 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 PLAC9Q5JTB6 97 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 SLC25A34Q6PIV7 304 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 TBX15Q96SF7 602 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 PPT2Q9UMR5 302 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 COL11A1P12107 1806 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 KIR2DS5A0A0G2JLQ3 304 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 A0A0G2JNG1 304 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 IGSF23A1L1A6 192 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 KIR2DS3K7RE56 304 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 ARPC3O15145 178 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 EIF4E2O60573 245 aaKnown RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 TMEM267Q0VDI3 215 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 KIR2DS5Q14953 304 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 FAM26DQ5JW98 314 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 LCORQ96JN0 433 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 KCNK7Q9Y2U2 307 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF195O14628 629 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 POLR2IP36954 125 aaKnown RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 SUCLG1P53597 346 aaKnown RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 A0A0U1RQF3 1178 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 SMPD1P17405 629 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 RIGQ13278 110 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 OR1C1Q15619 314 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 GUCA2BQ16661 112 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF468Q5VIY5 522 aaPredicted RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF813Q6ZN06 617 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 GSN-AS1Q9NRJ2 163 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 USP22Q9UPT9 525 aa11.44□□□□□ -0.58
COL6A3-203ENST00000353578 LSM2Q9Y333 95 aaKnown RBP11.44□□□□□ -0.58
COL6A3-203ENST00000353578 C9orf170A2RU37 121 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 DUSP3P51452 185 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 SLC25A1P53007 311 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 LRRTM3Q86VH5 581 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 FGF14Q92915 247 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 H3BQ15 152 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 OR1P1Q8NH06 330 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 C20orf27Q9GZN8 174 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 AUNIPQ9H7T9 357 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 ASB1Q9Y576 335 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 LMX1BO60663 402 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 GPANK1O95872 356 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 CCR2P41597 374 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 ID2Q02363 134 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 YOD1Q5VVQ6 348 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 ZNF732B4DXR9 585 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 CLDN15P56746 228 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 SPATA45Q537H7 98 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 LIPNQ5VXI9 398 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 NIT1Q86X76 327 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 RTP3Q9BQQ7 232 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 MRPS16Q9Y3D3 137 aaKnown RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 PLPP4Q5VZY2 271 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 TMPRSS9Q7Z410 1059 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 AMDHD2Q9Y303 409 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 PRAMEF20Q5VT98 475 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 MYPOPQ86VE0 399 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 GJD4Q96KN9 370 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 MRPL13Q9BYD1 178 aaKnown RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 SOX21Q9Y651 276 aaPredicted RBP11.43□□□□□ -0.58
COL6A3-203ENST00000353578 SCGB1A1P11684 91 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 ZXDBP98169 803 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 NCMAPQ5T1S8 102 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 PRR18Q8N4B5 295 aa11.43□□□□□ -0.58
COL6A3-203ENST00000353578 OR2W5A6NFC9 320 aa11.42□□□□□ -0.58
COL6A3-203ENST00000353578 HSPB1P04792 205 aaKnown RBP11.42□□□□□ -0.58
COL6A3-203ENST00000353578 RTP2Q5QGT7 225 aa11.42□□□□□ -0.58
COL6A3-203ENST00000353578 PTOV1Q86YD1 416 aa11.42□□□□□ -0.58
COL6A3-203ENST00000353578 ROBO4Q8WZ75 1007 aa11.42□□□□□ -0.58
COL6A3-203ENST00000353578 FAM72CH0Y354 149 aa11.42□□□□□ -0.58
COL6A3-203ENST00000353578 PRSS23O95084 383 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms