RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 WDSUB1Q8N9V3 476 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 HAS2Q92819 552 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 A0A1W2PR77 199 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 C1QCP02747 245 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 CD3DP04234 171 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 PI3P19957 117 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 FCGR2CP31995 323 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 MESTQ5EB52 335 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 SLC7A6Q92536 515 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 PTDSS2Q9BVG9 487 aa13.28□□□□□ -0.28
COL17A1-201ENST00000353479 SEC16AO15027 2179 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 CENPVL1A0A0U1RR11 272 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 LIFP15018 202 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 TNFRSF1AP19438 455 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 KRBOX4Q5JUW0 171 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 PRAMEF5Q5TYX0 476 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 PRAMEF6Q5VXH4 476 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 FLVCR1Q9Y5Y0 555 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 DUSP1P28562 367 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 GNG3P63215 75 aa13.27□□□□□ -0.28
COL17A1-201ENST00000353479 PLEKHB1Q9UF11 243 aaPredicted RBP13.27□□□□□ -0.28
COL17A1-201ENST00000353479 C17orf112F2Z3M2 114 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 FADS1O60427 444 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 DHRS3O75911 302 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 IGKV1D-16P01601 117 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 SELENOPP49908 381 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 FOXB2Q5VYV0 432 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 TSEN54Q7Z6J9 526 aaKnown RBP13.27□□□□□ -0.29
COL17A1-201ENST00000353479 RBMXL3Q8N7X1 1067 aaKnown RBP13.27□□□□□ -0.29
COL17A1-201ENST00000353479 KCNJ16Q9NPI9 418 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 PDCD1Q15116 288 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 ALKAL2Q6UX46 152 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 UCN2Q96RP3 112 aa13.27□□□□□ -0.29
COL17A1-201ENST00000353479 OR5H8P0DN80 308 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 ZNF14P17017 642 aaPredicted RBP13.26□□□□□ -0.29
COL17A1-201ENST00000353479 AADACP22760 399 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 ASAH1Q13510 395 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 SLC23A3Q6PIS1 610 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 OR51A4Q8NGJ6 313 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 FGF11Q92914 225 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 SPSB1Q96BD6 273 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 ARPC5LQ9BPX5 153 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 DICER1Q9UPY3 1922 aaKnown RBP13.26□□□□□ -0.29
COL17A1-201ENST00000353479 TMEM200CA6NKL6 621 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 OIP5O43482 229 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 SP1P08047 785 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 PPP3CBP16298 524 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 GNB1P62873 340 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 ABHD3Q8WU67 409 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 BAMBIQ13145 260 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 SF3B5Q9BWJ5 86 aaKnown RBP13.26□□□□□ -0.29
COL17A1-201ENST00000353479 HES7Q9BYE0 225 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 A0A1W2PQM1 296 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 CTSBP07858 339 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 MAGEB1P43366 347 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 PRSS12P56730 875 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 OPCMLQ14982 345 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 DEGS2Q6QHC5 323 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 TMEM200AQ86VY9 491 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 APH1BQ8WW43 257 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 NPAP1Q9NZP6 1156 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 PLPP2O43688 288 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 FGF5P12034 268 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 RFX2P48378 723 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 BRICD5Q6PL45 260 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 S100A7AQ86SG5 101 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 VWCEQ96DN2 955 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 SHARPINQ9H0F6 387 aa13.26□□□□□ -0.29
COL17A1-201ENST00000353479 MN1Q10571 1320 aaPredicted RBP13.25□□□□□ -0.29
COL17A1-201ENST00000353479 IGHV1-45A0A0A0MS14 117 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 ARL3P36405 182 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 PRDX4Q13162 271 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 KISS1Q15726 138 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 AADACL4Q5VUY2 407 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 OR8G2PQ6IF36 304 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 PRR7Q8TB68 274 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 NARFLQ9H6Q4 476 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 GLRX2Q9NS18 164 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 RNF150Q9ULK6 438 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 PSME4Q14997 1843 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 NKX2-8O15522 239 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 SERTAD4Q9NUC0 356 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 AQP7P3A6NL99 342 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 CDC14BO60729 498 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 OR8U8P0C7N1 319 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 DCTDP32321 178 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 CD96P40200 585 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 CTF1Q16619 201 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 CST9LP1Q5W188 147 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 S1PR3Q99500 378 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 DDA1Q9BW61 102 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 ZNF391Q9UJN7 358 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 PPP1CBP62140 327 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 BTG1P62324 171 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 GUCA2AQ02747 115 aa13.25□□□□□ -0.29
COL17A1-201ENST00000353479 ARHGEF39Q8N4T4 335 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms