RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 RAB19A4D1S5 217 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 PRSS44E7EML9 344 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 BET1O15155 118 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 GABREP78334 506 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 MFAP5Q13361 173 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 ZNF674Q2M3X9 581 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 TMEM182Q6ZP80 229 aaPredicted RBP16.06■□□□□ 0.16
CTSB-202ENST00000353047 ZSCAN4Q8NAM6 433 aaPredicted RBP16.06■□□□□ 0.16
CTSB-202ENST00000353047 TCEAL3Q969E4 200 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 MCHR2Q969V1 340 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 DEFB126Q9BYW3 111 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 LAT2Q9GZY6 243 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 SCPEP1Q9HB40 452 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 CFAP54Q96N23 3096 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 RAB27BO00194 218 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 RPL12P30050 165 aaKnown RBP16.06■□□□□ 0.16
CTSB-202ENST00000353047 HAGHQ16775 308 aa16.06■□□□□ 0.16
CTSB-202ENST00000353047 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
CTSB-202ENST00000353047 SCGNO76038 276 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 PNLIPP16233 465 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 FABP9Q0Z7S8 132 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 KCNG3Q8TAE7 436 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 FLVCR1-AS1Q8TAF5 88 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 OR10C1Q96KK4 312 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 LRFN5Q96NI6 719 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 SCGB3A2Q96PL1 93 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 SLCO5A1Q9H2Y9 848 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 CHST11Q9NPF2 352 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 YBX2Q9Y2T7 364 aaKnown RBP16.05■□□□□ 0.16
CTSB-202ENST00000353047 TNFRSF4P43489 277 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 YPEL5P62699 121 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 VAMP2P63027 116 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 TMEM156Q8N614 296 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 STT3BQ8TCJ2 826 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 DDIT4LQ96D03 193 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 RALGAPA1Q6GYQ0 2036 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 ZNF407Q9C0G0 2248 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 TRBV5-7A0A0A0MS05 114 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 H3BP45 60 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 PLPP3O14495 311 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 OR7C1O76099 320 aaPredicted RBP16.05■□□□□ 0.16
CTSB-202ENST00000353047 LINC00271P0C7V0 271 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 FOLR1P15328 257 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 CAPZBP47756 277 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 HERV-K104P61576 105 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 EIF2S3LQ2VIR3 472 aaKnown RBP16.05■□□□□ 0.16
CTSB-202ENST00000353047 TMEM128Q5BJH2 165 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 ZNF275Q9NSD4 429 aaPredicted RBP16.05■□□□□ 0.16
CTSB-202ENST00000353047 SHANK1Q9Y566 2161 aa16.05■□□□□ 0.16
CTSB-202ENST00000353047 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 OR6C65A6NJZ3 312 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 TNFRSF10CO14798 259 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 APOC1P02654 83 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 PTGFRP43088 359 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 F2RL1P55085 397 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 EMC4Q5J8M3 183 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 CATSPERDQ86XM0 798 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 C9orf40Q8IXQ3 194 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 PIK3IP1Q96FE7 263 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 RAB33BQ9H082 229 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 A0A1W2PPH5 198 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 NPIPA2E9PIF3 369 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 NPIPA3F8WFD2 350 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 H7C1Q1 480 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 NDUFA6P56556 154 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 MIDNQ504T8 468 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 UBALD1Q8TB05 177 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 SFT2D1Q8WV19 159 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 PIGLQ9Y2B2 252 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 FLVCR1Q9Y5Y0 555 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 COL4A4P53420 1690 aaPredicted RBP16.04■□□□□ 0.16
CTSB-202ENST00000353047 EFSO43281 561 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 RBMXL2O75526 392 aaKnown RBP16.04■□□□□ 0.16
CTSB-202ENST00000353047 CD38P28907 300 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 TAS2R31P59538 309 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 HFEQ30201 348 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 SLC5A7Q9GZV3 580 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 NDRG3Q9UGV2 375 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 COL4A3Q01955 1670 aa16.04■□□□□ 0.16
CTSB-202ENST00000353047 LRRK1Q38SD2 2015 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 MEX3AA1L020 520 aaKnown RBP16.03■□□□□ 0.16
CTSB-202ENST00000353047 IGHG1P01857 330 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 PJVKQ0ZLH3 352 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 FUT7Q11130 342 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 LPCAT3Q6P1A2 487 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 FBXW12Q6X9E4 464 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 VN1R1Q9GZP7 353 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 UBE2J1Q9Y385 318 aaPredicted RBP16.03■□□□□ 0.16
CTSB-202ENST00000353047 GPR37O15354 613 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 ZBTB25P24278 435 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 PPA1Q15181 289 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 MPPED2Q15777 294 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 SLC25A42Q86VD7 318 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 APCDD1LQ8NCL9 501 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 OR14K1Q8NGZ2 314 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 OR8U1Q8NH10 309 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 FBXL17Q9UF56 701 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 BORCS7-ASMTA0A0B4J1R7 106 aa16.03■□□□□ 0.16
CTSB-202ENST00000353047 A6NIZ1 184 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms