RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 IGFBP3P17936 291 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 CALRP27797 417 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 GCH1P30793 250 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 TMBIM6P55061 237 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 RPS23P62266 143 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF672Q499Z4 452 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 HSD17B12Q53GQ0 312 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 OR51A2Q8NGJ7 313 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 MRPL24Q96A35 216 aaKnown RBP16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 SLC30A2Q9BRI3 323 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 GPR173Q9NS66 373 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 KCNN3Q9UGI6 736 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 GPR160Q9UJ42 338 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 ABCA4P78363 2273 aa16.25■□□□□ 0.19
CHMP4A-201ENST00000347519 IGLV3-9A0A075B6K5 115 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 CCDC160A6NGH7 325 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 H3BMQ9 156 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 IGHV3-13P01766 116 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 CD2P06729 351 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 OR4A8P0C604 315 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 GNALP38405 381 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 DDOSTP39656 456 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 SPTAN1Q13813 2472 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 SPCS2Q15005 226 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 UBE2V2Q15819 145 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 TMEM42Q69YG0 159 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 Q6ZR03 302 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 KRT74Q7RTS7 529 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 RNF144BQ7Z419 303 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 UBASH3BQ8TF42 649 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 PIGCQ92535 297 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 DVL3Q92997 716 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 C12orf43Q96C57 262 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 FGF23Q9GZV9 251 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 PLEKHA1Q9HB21 404 aa16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 CISD1Q9NZ45 108 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-201ENST00000347519 PKDREJQ9NTG1 2253 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 IGKV1-9A0A0C4DH69 117 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF816-ZNF321PA0A0X1KG74 233 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 SMIM30A4D0T7 59 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 FAM221AA4D161 298 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF850A8MQ14 1090 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 TIMM8AO60220 97 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 GMDSO60547 372 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 RAF1P04049 648 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ADRA2CP18825 462 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 MAPK3P27361 379 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 KLF3P57682 345 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF529Q6P280 563 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 PAMR1Q6UXH9 720 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 LRRTM1Q86UE6 522 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 CSNK2A3Q8NEV1 391 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 OR13C9Q8NGT0 318 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ZNF420Q8TAQ5 688 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 NDNFQ8TB73 568 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 RAB2BQ8WUD1 216 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 PHYHIPQ92561 330 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 GFI1Q99684 422 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 CHST5Q9GZS9 411 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 ZCCHC4Q9H5U6 513 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 BATF3Q9NR55 127 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 GSTK1Q9Y2Q3 226 aa16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 RAI1Q7Z5J4 1906 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-201ENST00000347519 H0YL77 283 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 CST4P01036 141 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 SELEP16581 610 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 SRMP19623 302 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 FSTP19883 344 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 CA6P23280 308 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 SDC2P34741 201 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 PRDX4Q13162 271 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 MST1LQ2TV78 715 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 CEP78Q5JTW2 689 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 CLVS2Q5SYC1 327 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 ZBTB37Q5TC79 503 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 MOB3CQ70IA8 216 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 SERPINA12Q8IW75 414 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 C10orf35Q96D05 121 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 KCTD7Q96MP8 289 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 PSMG3-AS1Q96PY0 264 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 NKX3-1Q99801 234 aaPredicted RBP16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 DHRS9Q9BPW9 319 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 PAPOLGQ9BWT3 736 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 NDUFA13Q9P0J0 144 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 TAAR3PQ9P1P4 343 aa16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 RSL24D1Q9UHA3 163 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-201ENST00000347519 MLNRO43193 412 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 ARL6IP5O75915 188 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 CDRT1O95170 752 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 ATF1P18846 271 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 APOBEC3AP31941 199 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 SERPINB10P48595 397 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 MMP15P51511 669 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 UTS2BQ765I0 119 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 NR2C2APQ86WQ0 139 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 DNAAF1Q8NEP3 725 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 OR8G5Q8NG78 346 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 OR1M1Q8NGA1 313 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 NPRL2Q8WTW4 380 aa16.21■□□□□ 0.19
CHMP4A-201ENST00000347519 THRSPQ92748 146 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms