RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 LYZL6O75951 148 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 C1QBP02746 253 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 KISS1Q15726 138 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 PHYHD1Q5SRE7 291 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 ZNF585AQ6P3V2 769 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 POC1BQ8TC44 478 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 CMSS1Q9BQ75 279 aaKnown RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 ZNF275Q9NSD4 429 aaPredicted RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 MCTS1Q9ULC4 181 aaKnown RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 BOKQ9UMX3 212 aaPredicted RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 ZFYVE26Q68DK2 2539 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 J3QRE1 110 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 MT-CO3P00414 261 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 CD96P40200 585 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 DLX5P56178 289 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 PLA1AQ53H76 456 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 C5orf24Q7Z6I8 188 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 REEP6Q96HR9 211 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 SUCNR1Q9BXA5 334 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
CASC4-202ENST00000345795 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
CASC4-202ENST00000345795 MTRF1O75570 445 aaKnown RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 C4BPBP20851 252 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 EXOSC2Q13868 293 aaKnown RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 ZNF488Q96MN9 340 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 TAS2R3Q9NYW6 316 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 SESN1Q9Y6P5 492 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 ACACBO00763 2458 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 NCOA6Q14686 2063 aaPredicted RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 OR4E1P0C645 316 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 GAAP10253 952 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 GNRHRP30968 328 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 TLE1Q04724 770 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 IKZF1Q13422 519 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 OR2B11Q5JQS5 317 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 FNDC7Q5VTL7 733 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 RNLSQ5VYX0 342 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 FBXL14Q8N1E6 418 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 FOXB1Q99853 325 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 TAS2R8Q9NYW2 309 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 PFDN2Q9UHV9 154 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 IGHV1-45A0A0A0MS14 117 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 B8ZZF3 427 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 LPLP06858 475 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 VSIG8P0DPA2 414 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 COX6A1P12074 109 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 GLRA1P23415 457 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 ARF1P84077 181 aaKnown RBP11.74□□□□□ -0.53
CASC4-202ENST00000345795 ACSM1Q08AH1 577 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 LRRC75AQ8NAA5 344 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 TMEM231Q9H6L2 316 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 ASF1BQ9NVP2 202 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 TREM2Q9NZC2 230 aa11.74□□□□□ -0.53
CASC4-202ENST00000345795 PCP4L1A6NKN8 68 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 ZNF705EA8MWA4 302 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 RAB27BO00194 218 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 DIRAS3O95661 229 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 HAAOP46952 286 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 GPM6AP51674 278 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 DSCR4P56555 118 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 CATSPERDQ86XM0 798 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 ARHGEF39Q8N4T4 335 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 UCK1Q9HA47 277 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 PTTG3PQ9NZH4 202 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 TRAF3IP2O43734 574 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 VSIG10L2P0DP72 767 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 ANOS1P23352 680 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 HERV-K104P61576 105 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 PPP1R1AQ13522 171 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 KLF9Q13886 244 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 PGAP1Q75T13 922 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 NFAM1Q8NET5 270 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 ZFAND1Q8TCF1 268 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 CPT1CQ8TCG5 803 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 PAQR8Q8TEZ7 354 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 KCNK17Q96T54 332 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 CDC6Q99741 560 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 LAMA5O15230 3695 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 MYO18BQ8IUG5 2567 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 WRBO00258 174 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 XRCC2O43543 280 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 RAF1P04049 648 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 LIFP15018 202 aa11.73□□□□□ -0.53
CASC4-202ENST00000345795 SUCLG1P53597 346 aaKnown RBP11.73□□□□□ -0.53
CASC4-202ENST00000345795 UBE2NP61088 152 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms