RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 HIST1H3AP68431 136 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 MRPS34P82930 218 aaKnown RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 PITPNAQ00169 270 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 PMP22Q01453 160 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GPR176Q14439 515 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 RSPO4Q2I0M5 234 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 HYAL4Q2M3T9 481 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 RSPO1Q2MKA7 263 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GFOD2Q3B7J2 385 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 C2orf76Q3KRA6 126 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 HIST2H3PS2Q5TEC6 136 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FAM166AQ6J272 317 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 HIST2H3AQ71DI3 136 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 RHOUQ7L0Q8 258 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 BIVMQ86UB2 503 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 CCDC36Q8IYA8 594 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GPR137CQ8N3F9 429 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ZFP62Q8NB50 900 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 HAVCR1Q96D42 359 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 S100A16Q96FQ6 103 aaKnown RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 SCMH1Q96GD3 660 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 MRI1Q9BV20 369 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GHITMQ9H3K2 345 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 NIPAL2Q9H841 368 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GPR84Q9NQS5 396 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM38BQ9NVV0 291 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 RBFOX1Q9NWB1 397 aaKnown RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ETV7Q9Y603 341 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ARHGAP21Q5T5U3 1957 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 MED12LQ86YW9 2145 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 DMXL2Q8TDJ6 3036 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 A0A1B0GVI7 797 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 SLC17A2O00624 439 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 DBHP09172 617 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 PATE4P0C8F1 98 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 B4GALT1P15291 398 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 RAB3AP20336 220 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ERP29P30040 261 aaKnown RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GNALP38405 381 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 PTH2RP49190 550 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 TNFSF10P50591 281 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FLI1Q01543 452 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 SLC10A1Q14973 349 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 TESK1Q15569 626 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 CEACAM16Q2WEN9 425 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ELFN2Q5R3F8 820 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GLYATL3Q5SZD4 288 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FAM27BQ5VT28 67 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 GLT8D1Q68CQ7 371 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 MZT2BQ6NZ67 158 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 BAIAP2L2Q6UXY1 529 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 KRT74Q7RTS7 529 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 ABHD12BQ7Z5M8 362 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-202ENST00000345734 COMMD2Q86X83 199 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FNDC9Q8TBE3 224 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FAM3DQ96BQ1 224 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 MOB1AQ9H8S9 216 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 NLKQ9UBE8 527 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 FBLN5Q9UBX5 448 aa8.08□□□□□ -1.12
ATG4A-202ENST00000345734 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 BSNQ9UPA5 3926 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 A0A0B4J293 547 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM272A0A1B0GTI8 110 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 FAM240BA0A1B0GVZ2 78 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 ZNF780AO75290 641 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 ABOP16442 354 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 CTSSP25774 331 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 DEFB109BQ30KR1 87 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 TMEM69Q5SWH9 247 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 ASCL5Q7RTU5 278 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 NOXA1Q86UR1 476 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 SIAH3Q8IW03 269 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 TUSC5Q8IXB3 177 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 JAGN1Q8N5M9 183 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 OR52I2Q8NH67 350 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 FGFBP3Q8TAT2 258 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 CPT1CQ8TCG5 803 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 RAB40AQ8WXH6 277 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 ZC3HAV1LQ96H79 300 aaKnown RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 CCDC120Q96HB5 630 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 FAM71F1Q96KD3 344 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 CALHM2Q9HA72 323 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 GPR35Q9HC97 309 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 PLEK2Q9NYT0 353 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 MRPL15Q9P015 296 aaKnown RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 MYEF2Q9P2K5 600 aaKnown RBP8.07□□□□□ -1.12
ATG4A-202ENST00000345734 SPRR3Q9UBC9 169 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 SVILO95425 2214 aa8.07□□□□□ -1.12
ATG4A-202ENST00000345734 IGKV3D-15A0A087WSY6 115 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 MEIOCA2RUB1 952 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 HMX3A6NHT5 357 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 F8W036 122 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 CTDSPLO15194 276 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 GSTZ1O43708 216 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-202ENST00000345734 SYNGR4O95473 234 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 CD37P11049 281 aa8.06□□□□□ -1.12
ATG4A-202ENST00000345734 HTR2CP28335 458 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms