RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MRPS21P82921 87 aaKnown RBP17.58■□□□□ 0.4
HDAC4-201ENST00000345617 PRTGQ2VWP7 1150 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 RNASEKQ6P5S7 137 aaKnown RBP17.58■□□□□ 0.4
HDAC4-201ENST00000345617 C11orf42Q8N5U0 333 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 TEX101Q9BY14 249 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 NDUFB6O95139 128 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 OR2W3Q7Z3T1 314 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 ERASQ7Z444 233 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 A0A1B0GX78 115 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 APEHP13798 732 aaKnown RBP17.58■□□□□ 0.4
HDAC4-201ENST00000345617 PPOXP50336 477 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 PFN3P60673 137 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 TXNIPQ9H3M7 391 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 BANF2Q9H503 90 aa17.58■□□□□ 0.4
HDAC4-201ENST00000345617 AKR7A2O43488 359 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM11P17152 192 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 HLA-BQ31612 363 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 OR10G3Q8NGC4 313 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 MZB1Q8WU39 189 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 FZD9O00144 591 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 CRISP2P16562 243 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 LSM2Q9Y333 95 aaKnown RBP17.57■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF236Q9UL36 1845 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 BCAT2O15382 392 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-201ENST00000345617 HOXD9P28356 352 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-201ENST00000345617 BMPR1AP36894 532 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 CD200P41217 278 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 CYB561P49447 251 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 PIGTQ969N2 578 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 KIR3DX1Q9H7L2 352 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM218A2RU14 115 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 PRSS37A4D1T9 235 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 IL10RAQ13651 578 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 PLXNA1Q9UIW2 1896 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 A6NL46 340 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 BTG2P78543 158 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 ATP6V1FQ16864 119 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 DPPA3Q6W0C5 159 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 PACRGQ96M98 296 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-201ENST00000345617 HAPLN2Q9GZV7 340 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 CNOT1A5YKK6 2376 aaKnown RBP17.57■□□□□ 0.4
HDAC4-201ENST00000345617 TRIM61Q5EBN2 209 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 FOXB2Q5VYV0 432 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 FER1L6-AS2Q96M78 137 aa17.57■□□□□ 0.4
HDAC4-201ENST00000345617 G6PCP35575 357 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 MEOX1P50221 254 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 LIM2P55344 173 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 PPP1CAP62136 330 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF107Q9UII5 783 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-201ENST00000345617 CACNA1BQ00975 2339 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM191AQ9H0A3 160 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 STAG3L3P0CL85 134 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 PSMB5P28074 263 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 CTF1Q16619 201 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 GPR137Q96N19 417 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 C19orf53Q9UNZ5 99 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-201ENST00000345617 FITM1A5D6W6 292 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 M0QZ24 198 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 MARVELD1Q9BSK0 173 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 OBP2AQ9NY56 170 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 C1SP09871 688 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 BCL2L10Q9HD36 194 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 MBLAC1A4D2B0 266 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-201ENST00000345617 TARM1B6A8C7 271 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 HAND1O96004 215 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 SNRPNP63162 240 aaKnown RBP17.56■□□□□ 0.4
HDAC4-201ENST00000345617 ZDHHC23Q8IYP9 409 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 ATP5SQ99766 215 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 GPR84Q9NQS5 396 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 PARP14Q460N5 1801 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 ABCA3Q99758 1704 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 SLC10A3P09131 477 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 NDUFB7P17568 137 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 GNB1P62873 340 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 MENTQ9BUN1 341 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 LAT2Q9GZY6 243 aa17.56■□□□□ 0.4
HDAC4-201ENST00000345617 TAPBPO15533 448 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 EDDM3AQ14507 147 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 ZNF468Q5VIY5 522 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 RNF2Q99496 336 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 NXF2Q9GZY0 626 aaKnown RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 USP22Q9UPT9 525 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 RHOBP62745 196 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 ADGRG7Q96K78 797 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 ADAT1Q9BUB4 502 aaKnown RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 PTDSS2Q9BVG9 487 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 HRASP01112 189 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 TP53INP2Q8IXH6 220 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 CLDN15P56746 228 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 SELENBP1Q13228 472 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 OCEL1Q9H607 264 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 PCDHGA9Q9Y5G4 932 aaKnown RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 SNRPEP62304 92 aaKnown RBP17.55■□□□□ 0.4
HDAC4-201ENST00000345617 LRRTM3Q86VH5 581 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 C17orf78Q8N4C9 275 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 DYRK2Q92630 601 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 TMEM204Q9BSN7 226 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 Q9N2K0 584 aa17.55■□□□□ 0.4
HDAC4-201ENST00000345617 RRP8O43159 456 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms