RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CA6P23280 308 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 EEF1B2P24534 225 aaKnown RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 PSMB10P40306 273 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 TGM4P49221 684 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 ETV1P50549 477 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 TMEM33P57088 247 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 MFGE8Q08431 387 aaPredicted RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 OR8B8Q15620 311 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 CARTPTQ16568 116 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 HFEQ30201 348 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 ZBTB37Q5TC79 503 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 PEG10Q86TG7 708 aaKnown RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 ZNF786Q8N393 782 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 OR8S1Q8NH09 359 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 OR52N1Q8NH53 320 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 FAM168AQ92567 244 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 PELI1Q96FA3 418 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 FAM71F1Q96KD3 344 aaPredicted RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 PAPOLGQ9BWT3 736 aaKnown RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 YTHDF1Q9BYJ9 559 aaKnown RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 KRTAP4-6Q9BYQ5 205 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 COMMD4Q9H0A8 199 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 TRIM36Q9NQ86 728 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 G6PC2Q9NQR9 355 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 ENPP5Q9UJA9 477 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 SLC22A13Q9Y226 551 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 MPC1Q9Y5U8 109 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 IGHV1-69-2A0A0G2JMI3 117 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 TRBV2A0A0J9YWF9 115 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ZNF816-ZNF321PA0A0X1KG74 233 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 LRRC30A6NM36 301 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 TMEM212A6NML5 194 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 RGS10O43665 173 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 SERPINA3P01011 423 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CST4P01036 141 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ISG15P05161 165 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CDK1P06493 297 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ACHEP22303 614 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CRYBB2P43320 205 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 MAGEB1P43366 347 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CDH15P55291 814 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 TAS2R43P59537 309 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ALKBH1Q13686 389 aaKnown RBP10.06□□□□□ -0.8
SNCA-202ENST00000345009 WDR38Q5JTN6 314 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 RNLSQ5VYX0 342 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 LAIR2Q6ISS4 152 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 RPL22L1Q6P5R6 122 aaKnown RBP10.06□□□□□ -0.8
SNCA-202ENST00000345009 SPNS3Q6ZMD2 512 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CELF2-AS1Q8N7Q2 184 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ZNF676Q8N7Q3 588 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ERGIC1Q969X5 290 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 C10orf35Q96D05 121 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 MICU1Q9BPX6 476 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 PIMREGQ9BSJ6 248 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ADAT1Q9BUB4 502 aaKnown RBP10.06□□□□□ -0.8
SNCA-202ENST00000345009 MND1Q9BWT6 205 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 ISG20L2Q9H9L3 353 aaKnown RBP10.06□□□□□ -0.8
SNCA-202ENST00000345009 CHODLQ9H9P2 273 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 PLEKHA1Q9HB21 404 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 FKBP14Q9NWM8 211 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 FRRS1LQ9P0K9 344 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 PPP1R3CQ9UQK1 317 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 PIGLQ9Y2B2 252 aa10.06□□□□□ -0.8
SNCA-202ENST00000345009 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 A0A1B0GWJ7 208 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 C5orf63A6NC05 138 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 P2RY10O00398 339 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 HPXP02790 462 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 HLA-DPB1P04440 258 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 IRF2P14316 349 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 SLC25A16P16260 332 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CRHBPP24387 322 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 C21orf33P30042 268 aaPredicted RBP10.05□□□□□ -0.8
SNCA-202ENST00000345009 SLC35A2P78381 396 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 ODF4Q2M2E3 257 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 TMEM255AQ5JRV8 349 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 Q6ZR03 302 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 PRSS35Q8N3Z0 413 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 ZNF525Q8N782 197 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 OR10AD1Q8NGE0 317 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 OR5AK2Q8NH90 309 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 GATAD2BQ8WXI9 593 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 PIGCQ92535 297 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CCL17Q92583 94 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 PPP1R14AQ96A00 147 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 Q96MF0 132 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 OR2V2Q96R30 315 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 ZNF649Q9BS31 505 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CDCA4Q9BXL8 241 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CCDC90BQ9GZT6 254 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 DUSP21Q9H596 190 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 CLEC2DQ9UHP7 191 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 HHLA2Q9UM44 414 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 RHBDD3Q9Y3P4 386 aa10.05□□□□□ -0.8
SNCA-202ENST00000345009 F5H5P2 479 aa10.04□□□□□ -0.8
SNCA-202ENST00000345009 CDC14BO60729 498 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms