RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CPOQ8IVL8 374 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 HS3ST5Q8IZT8 346 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 OR52H1Q8NGJ2 320 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 BCAS4Q8TDM0 211 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 LRRC29Q8WV35 223 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 SPSB4Q96A44 273 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 C1orf147Q96MC9 270 aaPredicted RBP10.32□□□□□ -0.76
SGCA-202ENST00000344627 AMELYQ99218 206 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 PAPOLGQ9BWT3 736 aaKnown RBP10.32□□□□□ -0.76
SGCA-202ENST00000344627 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 MGAM2Q2M2H8 2515 aa10.32□□□□□ -0.76
SGCA-202ENST00000344627 MDFIC2A0A1B0GVS7 189 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 ARRDC5A6NEK1 342 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 C22orf46C9J442 243 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 NDUFA7O95182 113 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 LYNP07948 512 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 HOXB6P17509 224 aaKnown RBP10.31□□□□□ -0.76
SGCA-202ENST00000344627 PSMB10P40306 273 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 OPRL1P41146 370 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 GSK3AP49840 483 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 CBX1P83916 185 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 MICBQ29980 383 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 DNAL1Q4LDG9 190 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 PDLIM3Q53GG5 364 aaPredicted RBP10.31□□□□□ -0.76
SGCA-202ENST00000344627 TMEM236Q5W0B7 351 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 KCTD8Q6ZWB6 473 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 TIGD4Q8IY51 512 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 ST8SIA4Q92187 359 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 MICU1Q9BPX6 476 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 RHBDD3Q9Y3P4 386 aa10.31□□□□□ -0.76
SGCA-202ENST00000344627 ANXA2P2A6NMY6 339 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 TIMM23O14925 209 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 TOX4O94842 621 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 PTBP3O95758 552 aaKnown RBP10.3□□□□□ -0.76
SGCA-202ENST00000344627 ECDO95905 644 aaPredicted RBP10.3□□□□□ -0.76
SGCA-202ENST00000344627 KNG1P01042 644 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 SFTPBP07988 381 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 ANXA8P13928 327 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 CSNK2BP67870 215 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 APOFQ13790 326 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 SNCBQ16143 134 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 SNAPC1Q16533 368 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 METTL11BQ5VVY1 283 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 Q6YL49 198 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 C17orf107Q6ZR85 190 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 KRT77Q7Z794 578 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 FAM90A1Q86YD7 464 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 FTMTQ8N4E7 242 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 GCSAMQ8N6F7 178 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
SGCA-202ENST00000344627 CSNK2A3Q8NEV1 391 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 BBS1Q8NFJ9 593 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 OTOSQ8NHW6 89 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 FAM81AQ8TBF8 368 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 TBC1D15Q8TC07 691 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 PIGCQ92535 297 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 PPP1R3EQ9H7J1 279 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 TVP23BQ9NYZ1 205 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 ZNF319Q9P2F9 582 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 DNAJB9Q9UBS3 223 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 MEGF8Q7Z7M0 2845 aa10.3□□□□□ -0.76
SGCA-202ENST00000344627 hCG_38984A0A1B0GV85 526 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 ZNF850A8MQ14 1090 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 PSMD9O00233 223 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 DVL1O14640 695 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 TNFRSF13BO14836 293 aaPredicted RBP10.29□□□□□ -0.76
SGCA-202ENST00000344627 FKBP6O75344 327 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 TIPRLO75663 272 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 HCCSP53701 268 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 ARF6P62330 175 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 CDK5Q00535 292 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 IL5RAQ01344 420 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 DEFB112Q30KQ8 113 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 RUSC1-AS1Q66K80 236 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 BTN2A1Q7KYR7 527 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 COMMD2Q86X83 199 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 OR1M1Q8NGA1 313 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 SSMEM1Q8WWF3 244 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 DYRK2Q92630 601 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 WDFY2Q96P53 400 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 HIST1H2AAQ96QV6 131 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 CCL13Q99616 98 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 RTL8AQ9BWD3 113 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 RGCCQ9H4X1 137 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 RNPEPL1Q9HAU8 725 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 SMURF1Q9HCE7 757 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 DNAJB11Q9UBS4 358 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 TRRAPQ9Y4A5 3859 aa10.29□□□□□ -0.76
SGCA-202ENST00000344627 ZNF879B4DU55 563 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 M0QZ24 198 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 CDIPTO14735 213 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 GPR37O15354 613 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 PRODHO43272 600 aa10.28□□□□□ -0.76
SGCA-202ENST00000344627 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
SGCA-202ENST00000344627 KCNAB3O43448 404 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms